Gene Bcenmc03_4560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_4560 
Symbol 
ID6127382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp1548798 
End bp1549394 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content65% 
IMG OID641651657 
Producttoluene tolerance family protein 
Protein accessionYP_001778190 
Protein GI170736930 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2854] ABC-type transport system involved in resistance to organic solvents, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.345727 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0824487 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTC ATCTGTTTGC TTTCGTCGCG GCGGCCGCCG TGTCGGTTTC CGCTTTCGCG 
CAGAGCGCGC CGGTCGATGT CGTCCGCACG GCGGTCGAGG GTACCGTCAA TGCGATGAAG
GCCGATCCGG TCGCGCGCGG CGGCGACATG GCGAAGATCA CGCAGGTCGT CGAGCAGCGC
TTCCTGCCCG TGACCAACTT CGAGCGCACG ACCCGCATCG CGGTCGGCGA CGCGTGGAAG
CAGGCCACGC CGCAACAGCA GCAGGAGCTG TACAAGCAGT TCCGCTTGCT GATGACGCGC
ACCTACGCCG CGTCGCTCGC GCAGCTCGGC AACCAGGACG CGAAGTTCTC GTTCAAGCCG
GGCGGCGCGT CGGGCGCGGA CGCGCTCGTG CAATCGACGG TGACGACGCC GGGCGACAGC
CAGTCGGTCG GCTATCGTCT CGGCAAGGTC GGCAACGACT GGAAGATCTA CGACATCGAC
ATGTCGGGCG CGTGGCTGAT CCAGGTCTAT CAGGGTCAAT TCAAGAGCCA GCTCGCGACG
GGCGGGATCG ACGGCCTGAT CGCGTATCTG CAGAAACACA ATTCGCGGAC GAACTGA
 
Protein sequence
MKRHLFAFVA AAAVSVSAFA QSAPVDVVRT AVEGTVNAMK ADPVARGGDM AKITQVVEQR 
FLPVTNFERT TRIAVGDAWK QATPQQQQEL YKQFRLLMTR TYAASLAQLG NQDAKFSFKP
GGASGADALV QSTVTTPGDS QSVGYRLGKV GNDWKIYDID MSGAWLIQVY QGQFKSQLAT
GGIDGLIAYL QKHNSRTN