| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4559 |
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| Symbol | |
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| ID | 6127381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 1545838 |
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| End bp | 1548471 |
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| Gene Length | 2634 bp |
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| Protein Length | 877 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641651656 |
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| Product | hopanoid biosynthesis associated RND transporter like protein HpnN |
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| Protein accession | YP_001778189 |
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| Protein GI | 170736929 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | [TIGR03480] hopanoid biosynthesis associated RND transporter like protein HpnN |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.151597 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGACAT CTCTCATCGT CCGACTCGTT GCGTGGTCGG TGCGCCGCCC CGTCTGGGTC
GTCGTCCTGT CGCTCGTCAT CGCCGCCTTC AGCGGCGTCT ACGTCGCGCA GCATTTCAAG
ATCAACACCG ACATCAGCAA GCTCGTCGAT GCGGAGCCGC AATGGGCCGC ACTGAGCAAG
GCGGTCGACA ACGCGTTCCC GCAACGCAAC GGCACGATCC TCGCCGTCGT CGAGGCACCC
GCGCCCGAAT TCGCGACTGC CGCCGCGCAT GCGCTCACCG AAGCGCTGCG CAAGGACGCC
GATGCCGGCC GTATCGGCCC GGTCGCCGAA CCGGGCGGCG GGCCGTTCTT CGAGCACAAC
GGGCTGCTGT TCCTGTCGCC GCAGGAGGTC GCCGATACGA CCGCGCAGCT CGCGAGCGCC
CGCCCGCTCG TCAACGAACT CGCGAAGAAC CCGAGCCTCA CCGGGCTCGC CACCACGCTG
TCCACCACGC TCGGCCAGCC GCTGCTGACC GGCCAGGTGA AGCTGCCCGC GATGGCGAAG
CTGCTCGCGC GCAGCGCCGC GACGGTCGAC GACGTGCTGG CCGGCAAGCC GGCCGCGTTC
TCGTGGCGCG CGCTGGTCGA CAACGACGCG CCGCGGCAGC CCGCGCGCGC GTTCGTCACC
GTGCAGCCGG TGGTCAACTA CGGCGCGCTG AAGGCCGGCG CGGCAACGAG CCAGGTGATC
CGCGACGCGG CCCGTTCGCT CGATCTCGAC AAGCGCTACG GCGCGGCCGT GCGCCTGACC
GGCGAACAAC CGCTCGCCGA CGACGAATTC GCGTCGGTCG AAGACGGCGC CGCGCTCAAC
GGCGTACTCA CGCTGCTCGC CGTGCTCGTG ATCCTGTGGC TCGCGCTGCG CTCGAAGCGG
ATGATCGGCT CGGTGCTCGT CACGCTGTTC GTCGGGCTCG TCGTGACGGC CGCGCTCGGC
CTCGCGATGG TCGGCTCGCT GAACATGATC TCGGTCGCGT TCATGGTGCT GTTCGTCGGC
CTCGGCGTCG ATTTCTCGAT CCAGTACGGC GTGAAGTACC GCGAGGAGCG CTTCCGCGAC
GAGCGCATCG ATCACGCGCT GATCGGCGCC GCGCATTCGA TGGGCATGCC GCTCGCGCTG
GCCACGGCGG CCGTCGCGGC GAGCTTCTTC TCGTTCATCC CCACCGCGTA TCGCGGCGTG
TCCGAGCTCG GCCTGATCGC GGGCGTCGGG ATGTTCGTCG CGCTGCTGAC CACGCTCACG
CTGCTGCCCG CGCTGCTGCG CCTGTTCGCG CCGCCGGGCG AATCGAAGAC GCCGGGTTTC
CCGTGGCTCG CGCCGGTCGA CGATTACCTC GATCGCCATC GCAAGCCGAT CCTGATCGGC
ACGCTCGCGG TCGTGATCGG CGCGCTGCCG CTGCTCGCGT TCCTGCATTT CGACTTCAAC
CCGCTGCACC TGAAGGACCC GAACAGCGAA TCGATGGCGA CGCTGCTCGC GCTGAAGGAT
TCGCCGGAAG CCGCCGTCAA CGACGTCACG CTGCTCGCGC CGTCGCTCGC GCAGGCCGAG
GCGGCCGCGA AGCGCCTCGA CGCGCTGCCC GAAGTCGGCC GCACGACCAC GCTGTCGACC
TTCATCCCGG CCGACCAGCC GGCCAAGCGC GCGGCGATCG CCACGGCCGC GAGCGAACTG
CTGCCCGCGC TGACGCAGCC GGCCGCGCCG CCCGCGACCG ACGCGCAACG CGTGGCCGCG
CTCAAGCGCG TGTCGGATCT GCTGAGCTAT GCAGCCGAAG ATCACCCGGG CCCGGGCGCC
GCCGCCGCGC AGCATCTGTC CGCGTCGCTC GCGAAGCTCG CCGCCGCCGA CAGCGCGACG
CGCGACCGTG CCGAGCGCGC GTTCTCCGAT ACGCTGCGCA TCGCGCTCAA CCAGCTCGCC
GCGCTGCTGC AGCCGCAGGA CATCACGCGC GAATCGCTGC CGCCACAGAT CGTGCGCGAC
TGGGTCGCGC CGGACGGCCA CGCGCTCGTG CAGATCTCGC CGAAGGTGCC GAAGGGCGTC
GATCCGAACG ACGACACGAT GCTGCGCCGT TTCGCCAAGG CCGTGAAGGC CGCGGAGCCG
GATGCGACCG GCGGGCCGAT CTCGATCCTG CATTCGGCCG ACACGATCAT CAACGCGTTC
CTGCATGCGG CGCTGTGGTC GATCATCTCG ATCACGGTCC TGCTGTGGGT CACGTTGCGC
CGCTTCGGCG ACGTGCTGCG CACGCTGGTG CCGCTGCTCG TGTCGGGCAT CGTGACGCTC
GAGATGTGCG TCGTGCTCGG CATGTCGCTG AACTTCGCGA ACATCATCGC GCTGCCGCTG
ATGCTCGGCG TCGGCGTCGC GTTCAAGGTG TATTTCGTGA TGGCGTGGCG CGCGGGGCAG
ACGGGGCTGC TGCATTCGAG CCTCACGCAC GCCGTGCTGT TCAGCGCCGC GACGACGGCA
ACCGCCTTCG GCAGCCTGTG GCTGTCGCAC CATCCGGGCA CGTCGAGCAT GGGCAAGCTG
CTCGCGCTGG CCCTGACCTG TACGCTGATC GGCGCCGTGG TGTTCCAGCC CGTCCTGATG
GGCAAACCGC GCGTCAAACG CGCCAAGAAC CAATCGCAAG GAATCAATGA ATAA
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| Protein sequence | MVTSLIVRLV AWSVRRPVWV VVLSLVIAAF SGVYVAQHFK INTDISKLVD AEPQWAALSK
AVDNAFPQRN GTILAVVEAP APEFATAAAH ALTEALRKDA DAGRIGPVAE PGGGPFFEHN
GLLFLSPQEV ADTTAQLASA RPLVNELAKN PSLTGLATTL STTLGQPLLT GQVKLPAMAK
LLARSAATVD DVLAGKPAAF SWRALVDNDA PRQPARAFVT VQPVVNYGAL KAGAATSQVI
RDAARSLDLD KRYGAAVRLT GEQPLADDEF ASVEDGAALN GVLTLLAVLV ILWLALRSKR
MIGSVLVTLF VGLVVTAALG LAMVGSLNMI SVAFMVLFVG LGVDFSIQYG VKYREERFRD
ERIDHALIGA AHSMGMPLAL ATAAVAASFF SFIPTAYRGV SELGLIAGVG MFVALLTTLT
LLPALLRLFA PPGESKTPGF PWLAPVDDYL DRHRKPILIG TLAVVIGALP LLAFLHFDFN
PLHLKDPNSE SMATLLALKD SPEAAVNDVT LLAPSLAQAE AAAKRLDALP EVGRTTTLST
FIPADQPAKR AAIATAASEL LPALTQPAAP PATDAQRVAA LKRVSDLLSY AAEDHPGPGA
AAAQHLSASL AKLAAADSAT RDRAERAFSD TLRIALNQLA ALLQPQDITR ESLPPQIVRD
WVAPDGHALV QISPKVPKGV DPNDDTMLRR FAKAVKAAEP DATGGPISIL HSADTIINAF
LHAALWSIIS ITVLLWVTLR RFGDVLRTLV PLLVSGIVTL EMCVVLGMSL NFANIIALPL
MLGVGVAFKV YFVMAWRAGQ TGLLHSSLTH AVLFSAATTA TAFGSLWLSH HPGTSSMGKL
LALALTCTLI GAVVFQPVLM GKPRVKRAKN QSQGINE
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