| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4555 |
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| Symbol | |
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| ID | 6127377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | + |
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| Start bp | 1540742 |
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| End bp | 1541995 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641651652 |
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| Product | squalene-associated FAD-dependent desaturase |
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| Protein accession | YP_001778185 |
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| Protein GI | 170736925 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1232] Protoporphyrinogen oxidase |
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| TIGRFAM ID | [TIGR03467] squalene-associated FAD-dependent desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.160695 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGAA CCGTCCACGT GATCGGCGCA GGACTCGCGG GCCTGTCGGC CGCGGTCGAA
TTGCAACGTC GCGGGCGCCG CATCGTGTTG CACGACGCGC ATGCACACGC GGGCGGCCGC
TGCCGCTCGT GGTTCGACGG GACGCTGAAC ACGACGCTCG ACAGCGGGCT GCATACGGTT
TTCGCGGGAC AGCCCGCGAC GCAGCGCTAC CTGCGCGCGA TCGGCGCGGC CGATCAGCTC
GCGGGGCCCG CGCTGGCTGA ATTCCCGGTC GTGGACATCG CGTCGCAGCA GCGCTGGACG
CTGCGTTTCG GCAACGGCCG CTGGCCGTCG TGGCTGTTCG ATGCCGCGTC GCGCGCACCG
GGCACGACGC CGCTCGACTA CCTCGCGCTG GCCCCGCTTG CGTTCGCCCG CACGGGCCGC
TCGCTCGCGC AGACGATGCG ATGCGACGGC GTGCTGTGGG ATCGCTGGCT GCGACCGTTT
TTCCTCGGGG TGCTGAATAT CGAGCCGCGC CACGCGAGCG CCGAGCTCGC GCGTGCCGCG
CTGTGCGGCA CGTTTGCCGC GGGCGGCCCC GGCTGCCGCC CGCTCGTCGC GCGCCGCGGG
CTCGGCAGCG CGTTCGTCGA ACCGGCGCTG CGGATGCTGC AGCACGGCGG CGCGCAGATC
CGCCTGAATT CGCGGCTCGA CGCGTTCGAA TTCGGCGCGC ACGGCAATGC GGTCGATGCG
GTATCGGTCG GCGGCGAGCG CATCGATCTC GCGCCGGGCG ACGCGGTCGT GCTGGCCGTG
CCGCCCGAGG TCGCGCAGCC GCTCGTGCCC GAACTCGCCG CGCCCGACAC GTTCAGCGCG
GTCGTGACCG CGTATTTCGC GGTCGACGCG TCGACCGGCA ACCCGCTGCA GACGACCGTC
GTCAACGGTG TCGTCGACGC GGTGCGGACC GGCGACGGCC TGCTCGCGGC GACGATCCGC
GATGCGGGCC GCTGGCTCGA CATGCCGCGC GACACGCTCG CGCGGCGCAT CTGGGAAGAC
GTCGCGCGCG TGAGCGGCGC GAACCCGGAA ACCATTCCCG CGTGGCAGCT CGTCGTCGAG
CCGCGCGCGG GCTTTGCGGC GGTGCCGTCG CAGGAAATGA AACGTCCGGC CGTGCGTACG
CGCTGGACCA ATCTTGTACT CGCGGGCGAC TGGATTGCCA CCGGCTTGCC CGCCACGATC
GAGGGCGCGA TCCGTTCCGG CCAGCTGGCC GCGGACGTGC TCCAGACGCA ATAA
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| Protein sequence | MPRTVHVIGA GLAGLSAAVE LQRRGRRIVL HDAHAHAGGR CRSWFDGTLN TTLDSGLHTV
FAGQPATQRY LRAIGAADQL AGPALAEFPV VDIASQQRWT LRFGNGRWPS WLFDAASRAP
GTTPLDYLAL APLAFARTGR SLAQTMRCDG VLWDRWLRPF FLGVLNIEPR HASAELARAA
LCGTFAAGGP GCRPLVARRG LGSAFVEPAL RMLQHGGAQI RLNSRLDAFE FGAHGNAVDA
VSVGGERIDL APGDAVVLAV PPEVAQPLVP ELAAPDTFSA VVTAYFAVDA STGNPLQTTV
VNGVVDAVRT GDGLLAATIR DAGRWLDMPR DTLARRIWED VARVSGANPE TIPAWQLVVE
PRAGFAAVPS QEMKRPAVRT RWTNLVLAGD WIATGLPATI EGAIRSGQLA ADVLQTQ
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