| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4546 |
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| Symbol | |
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| ID | 6127368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 1531958 |
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| End bp | 1532557 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641651643 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_001778176 |
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| Protein GI | 170736916 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02943] RNA polymerase sigma-70 factor, TIGR02943 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000000107247 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.919602 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGTCCG CACACGACGA CCCCGCCTAT CTCGCGCAAC TGCGGCACGA CCTGCTGCGC
TTCGCACGAC TCCAGCTCCG CGATACCGAC GCGGCCGAAG ACGCCGTGCA GGAAGCGCTG
ACTGCCGCGT GGTCGCATGC CGGCGAGTTC GCCGGGCTGT CGGCCCACAA GACCTGGGTG
TTCGGCATCC TGCGCAACAA GCTGATCGAC GTGCTGCGCG CACGGCAGCG GATGGTGAGC
CTGACCGCGC TCGATGCGGA GCTCGACGGC GAATCGATAC TCGATCGCGA ATTATTCAAG
GACAACGGAC ACTGGGCCGC GCATGCGAAA CCGCGACCGT GGCCGAAGCC CGACACGCTG
TTGCAGCAAC AGCAGTTCTG GACGCTGTTC CAGGTCTGCC TCGACCATCT GCCGGAGCAG
ATCGGACGCG TGTTCATGAT GCGCGAATTC CTCGATGTCG AGATCGCGGA CATCTGCAAC
GAATTGACGT TGACGACGAA TCATTGCAGC GTGCTGCTGT ACCGGGCCCG CACACGCCTG
CGAACCTGCC TGAGCGAAAA AGGACTGACG ACCGAAGATG CTGCCGGGGA AATGTACTGA
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| Protein sequence | MLSAHDDPAY LAQLRHDLLR FARLQLRDTD AAEDAVQEAL TAAWSHAGEF AGLSAHKTWV
FGILRNKLID VLRARQRMVS LTALDAELDG ESILDRELFK DNGHWAAHAK PRPWPKPDTL
LQQQQFWTLF QVCLDHLPEQ IGRVFMMREF LDVEIADICN ELTLTTNHCS VLLYRARTRL
RTCLSEKGLT TEDAAGEMY
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