Gene Bcenmc03_4542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_4542 
Symbol 
ID6127364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp1528542 
End bp1529603 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content63% 
IMG OID641651639 
ProductparB-like partition protein 
Protein accessionYP_001778172 
Protein GI170736912 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0082945 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCCT CCCAATTCGC CAAAGGATTC CAAGCGCGCC CGGATATCAC GACGAGCGAG 
AAGCGCACGG CGCTTGATCG GCTCAATGCG ATCGACGGCA TCGTCAAGTC CGAGACGCCG
ACCCCGGTGC CGACCAAATC CGCGAAGAAG GACATCGCAC CGCCGCCAGC TCCGGAATTC
ACGATCGATC CGTCCATCGA CGAATCGCCG CAATATCGCG CGTGGCGCCT CGAGAATCGC
TATGCGCCCG GGCAGGTGAT CGAACTGCCG CTGAAGGCCA TCAAGCACAG CCCGTTCAAC
CCGCGGCACT TCTATCTGAA ATCGTCGATT GCCGAACTCG CGGTCAACCT CGCGAAGCAG
GGGCAGCAGC AGGCGATCCA CGTGATTCCG GATTACGACA ATCCGGGCAC GTATTTCGTC
AGCGACGGCG GCCGCCGCGT GCGGGCGCTG AAGGAAGCGA ACAAGGAGTC GGTCAAGGCG
ATCGTGATCG ACGTGCCGAT CGGCATCCAG AGCTACAAGC TCGGCTACGA CCTCAACGTT
CAGCGCGATT CGCAGACGGT GTTCGACAAC GCGGTCGTGT GGCGCCGCTT CCTCGACGAC
AAGCATTTCC AGAGCCAGAA AGAACTCTCC GAGCATCTCG GCCTCGACGA GTCGACGGTG
GCCGTCGCGC TGTCGATCGG CAAGTTGCCG GAAGCGATCA TGCAGGAAAT GGTCGCGCGT
CCCGATCGCT TCGGGTCGAA CATGGCGTAT CAGGTCGGCC GCTATCACAA TGCGCGCGGC
ACCGAGGCCA CGCTGCGGCT GATCAACAAG ATCGTGTCGG ACGATCTCAG CACGCGCCAG
GTGTCGGACA TCGTCAAGGG CCGCGTCGCG GCGCAAGAGA CGCCGAAGGC CGCGGGCCGT
CAGCGCTATG CGCAGCGTCT CGAGATCAAG CTTGGCGGCA AGTCGGTCGG CGACCTGAAG
TCGTATGGCG AAGACCGCAT CGAACTGCGC CTGCGTGGCC TCCCGAAGGA CAAGCGCGAC
GCGATCCTCG AGCAGCTCGA GCGAATGCTG TTGTCGGAGT AA
 
Protein sequence
MKPSQFAKGF QARPDITTSE KRTALDRLNA IDGIVKSETP TPVPTKSAKK DIAPPPAPEF 
TIDPSIDESP QYRAWRLENR YAPGQVIELP LKAIKHSPFN PRHFYLKSSI AELAVNLAKQ
GQQQAIHVIP DYDNPGTYFV SDGGRRVRAL KEANKESVKA IVIDVPIGIQ SYKLGYDLNV
QRDSQTVFDN AVVWRRFLDD KHFQSQKELS EHLGLDESTV AVALSIGKLP EAIMQEMVAR
PDRFGSNMAY QVGRYHNARG TEATLRLINK IVSDDLSTRQ VSDIVKGRVA AQETPKAAGR
QRYAQRLEIK LGGKSVGDLK SYGEDRIELR LRGLPKDKRD AILEQLERML LSE