Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_4504 |
Symbol | |
ID | 6127326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 1481197 |
End bp | 1483434 |
Gene Length | 2238 bp |
Protein Length | 745 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641651601 |
Product | hypothetical protein |
Protein accession | YP_001778134 |
Protein GI | 170736874 |
COG category | [S] Function unknown |
COG ID | [COG1944] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00702] uncharacterized domain [TIGR03604] bacteriocin biosynthesis docking scaffold, SagD family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCGATG ATCTTTCGCG CGTATTGCGC TTCAAGCCGC ACCTGCTCGT GCTCGATGCC GGGCCGGAGA CGCTGTTCGT CGTCGACGAA TTCAAGCGCG CGATGCTGTC CGGCGCGATC TTCGTGCGGA TCGCCGCGTG CCTGCGGGCG CGCATGACGA TTGCCGAGAT CGTGACGTCG CTGGCCGGCA CGTTCGGTGA ATGGGACGTG CTCGCGCGGC TCGATCACCT GGTGCGGCGC GGCTACGTGC GCGCCGATCC GCCGCACGGC GACGATGCGG CGCGCGGCTT CTTCGAACGG GCCGGGCTCG ACGGCGACGC CGCGTGCGCG CGCATGGCCC AACTGCGGGT CGCGGTGGAG ACGTTCGGTG CGGACGGTGC GGCGCTCCGG CGCGCGCTCG ACGCGGCCGG TATCGGCATC GCAAAGGAGG CCGAACTGAC CGTCGCGATC GTCGATACGC ACGACCGCGA CGATCTCGCC GCGTATGCCG CCCGCGTGGC GGCGCGCGGC GGTGCGCTGC TCGTCGTGGC GACCGGCGGC GTGCAGACGC TGATCGGACC GTTGCTGGCC GGCGGCGGCG CGCTCGCCGA GGCGCCGTGC ATCGAATGCG TGCGCTACTG GATGCGCATC AACCGGCCGG TCGAGGCGCT GCTGGCGCGC CATCACGGCA GCGACGCGAC GCGTGTACCG GTGGCTGCGT CGCGTGCGGC CGCCGCCGCC GCAGTCGCGC TCGTGGCCGC GACGGTCGAG CAGCTCGCGG TCAACCGCGC GGTCGCGGAA CGTGCGCAAA CGCACATCGT CGCGCATCGA CTTGACACGC TGGCCGTCGA ATGTCATCGC GTGGTCAGGC GGCCGCAATG CCCGTGCTGC GGGAATCCCG CGTGGATGCG CGAGCAGGCG GCGCGTGCGC CGCGACTCGC CGGGGATGCG CCGCTGGCGC GGACGGACGG CGGCTACCGG AGCGCCGATC CGCAACAGGT GTTCGCGCGT CACGCGCATC TGATCTCGCC GGTCAGCGGC GCGATCGCGT ATCTGCATCC GATGCCGAAG CGGCACGCGG GCCTGCGCAA GGTCTATGCG TCGGGCTTTC TCGTATGTCC GGCCGCCGTG CCGGACAGCA ACCGGTTCGA CCGGCTCTGC TCCGGCAAGG GCCGCACCGA CGAGCAGGCC CGCACGAGCG CGCTGTGCGA GGCGCTCGAA CGTTTCAGCA GCGTGTATCA GGGCGACGAG GCGACGGTGA CCGGCAGCCT CGACAGCCTG CGCGCCGATC CGGCCTGCGA CGCCGAACCG ATCCATGTGA ACGCGCTTCA GCAGTTCAGC GAACGGCAAT TCGACGCGCG CGACGCGATC AACGCGTTGA CCCGCGATGT CCGCAAGCAG GTGCCGCCGC GCTTCACGTC GCGCGACGTG ATCGACTGGA CGCCTGCGTG GTCGCTCGTG AACGGCCGGC GTCGCCTCGT GCCGCTGAGC TACTGCTACG CGGAAACGCC CGACAGCGCG CAGGCCACGG CCGCCTGCGT GCACAACCCG AACGGCTGCG CGGCCGGCTC GAGCCTCGAC GAGGCGACTC TGCAAGGCAT GCTCGAGCTG ATCGAGCGCG ATGCGGTCGC GATCTGGTGG TACAACCGGA TCGCGCGCCC CGGCATCGAT CTCGCGGCTT TCGACGATCC GTATTTCGAC GCGCTCGTGC ACGAGTACGC GACGTTCGGA TGGCGTGTAT GGGCGCTCGA CATCACCACC GATCTCGCGG TGCCGACCGT GGTCGCGCTC GCGGAGAATC CGCAGGACGG GCGTTTCTCG ATCGGTTTCG GCTGTCATCT CGATGGCCGG ATCGCGGTGC AGCGGGCGCT GACCGAAGTC AACCAGTTGC TCGATATCGC GGCGGATGCG CCGCATCCGT GGGATCGCGA CACGCTTTCG TCGACCGGAT TTCTGTATCC GGCGGCAGGT ATGCCGGCAA CGACGCCTTC GACGTGGCAA CGGGCCGATG CCGCGTCGTT ACCGGCGGTG CTCGCGGAGT GTGTCGGGCG CATCGCGGCA GCCGGCATGG ACGTGCTCGT CGTCGACAAG ACGCGGCCTG ATATCGGCTT GTCCGTGGTG CAGGTGATCG CACCGGGGCT GTGCCATTTC TGGCCGCGTT TCGGTGCGCG GCGACTGTAT TCGGTGCCGG TGGCGCTGGG TTGGCGCGCG CAGCCGTGCG ACGAAACGGC GTTGAATCCG GCGCTGCTGT TTCTGTGA
|
Protein sequence | MLDDLSRVLR FKPHLLVLDA GPETLFVVDE FKRAMLSGAI FVRIAACLRA RMTIAEIVTS LAGTFGEWDV LARLDHLVRR GYVRADPPHG DDAARGFFER AGLDGDAACA RMAQLRVAVE TFGADGAALR RALDAAGIGI AKEAELTVAI VDTHDRDDLA AYAARVAARG GALLVVATGG VQTLIGPLLA GGGALAEAPC IECVRYWMRI NRPVEALLAR HHGSDATRVP VAASRAAAAA AVALVAATVE QLAVNRAVAE RAQTHIVAHR LDTLAVECHR VVRRPQCPCC GNPAWMREQA ARAPRLAGDA PLARTDGGYR SADPQQVFAR HAHLISPVSG AIAYLHPMPK RHAGLRKVYA SGFLVCPAAV PDSNRFDRLC SGKGRTDEQA RTSALCEALE RFSSVYQGDE ATVTGSLDSL RADPACDAEP IHVNALQQFS ERQFDARDAI NALTRDVRKQ VPPRFTSRDV IDWTPAWSLV NGRRRLVPLS YCYAETPDSA QATAACVHNP NGCAAGSSLD EATLQGMLEL IERDAVAIWW YNRIARPGID LAAFDDPYFD ALVHEYATFG WRVWALDITT DLAVPTVVAL AENPQDGRFS IGFGCHLDGR IAVQRALTEV NQLLDIAADA PHPWDRDTLS STGFLYPAAG MPATTPSTWQ RADAASLPAV LAECVGRIAA AGMDVLVVDK TRPDIGLSVV QVIAPGLCHF WPRFGARRLY SVPVALGWRA QPCDETALNP ALLFL
|
| |