Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_4492 |
Symbol | |
ID | 6127314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 1465231 |
End bp | 1467735 |
Gene Length | 2505 bp |
Protein Length | 834 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641651589 |
Product | type VI secretion system Vgr family protein |
Protein accession | YP_001778122 |
Protein GI | 170736862 |
COG category | [S] Function unknown |
COG ID | [COG3501] Uncharacterized protein conserved in bacteria [COG4253] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01646] Rhs element Vgr protein [TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGACC TGGCGGCATT CATTCGAACC CCGTTTTTCC AGCAAGACAA ACGCCTGCTC GCGCTGTCTT TCCCCCACGA CGACGCGCCG TCGGTGACCG ACTCGTACGG GCGGCAACGT CCGGCGCGGC TGGTCGCCGA GCGACTCGTC GCGCACGAGG GGCTCGGGAT CGATTTCACG TTCGAGGTGA CGTTGTTGTC GGGTGAGGCG GGCGTCACGC TGGCCGACAT GCTGGGCAAG CTGCTCGCGG TGTCGATGGT GCGCCCCGAC GGCGGCCTGC GTTATTTCAC CGGTTACTGC ACCGAGTTTT CGCTGGTCCG CAACGACGAT TCGGTTGCGG AATATCGCGC GGTGCTGCGC CCGTGGAGTC ACTTCCTGCG GACCCGCGTG AACAACCGCC TGTTCCTCGG CCAATCGCTG CAGCAGCAGA TCGGCACGCT GCTCGCCGAC TACCAGGGGC TCGCGCCGTC GTGGGAGTGG CGCGTGCGCG GCGACGATCC GGCGCGCACG ATGAACGTCC AGGGCGGCGG GCTCGGCGAA AGCGACTGGA ACTACATCGT TCGCCATCTG GAAGCCGTCG GGTTCCTGTA TTGGTGGGAG CATGACGAGA AAGGCGTGAA GCTGATCGTC GGCGACGACA GCACGGTGCA GTGCCCGGCC GTCGACGGCC GCTCGCCGCA GATCCGCTTC CAGACGCACG ACGGCCCGAT GGCCGCCGAC GCCATTTCGC AATGGTCCGC GGTACGGTCG CTATCGGCCG GTAGCTACAG CGCGACGGCG TTCGACTTCA AGGCGCCGCA TGCGGCCCAC GCGCAGATTC CGACGCTGCA TCCGCCGGGC GTCGCGCCGC AGGTCGAGCA TCACGAATAC GTGGGGCACT ACGGCTTCGC GAAGCAGACG CGCGCCGGCG ACGCGCTCGC GCGTGTGCGG ATGGAAGAGA TCGAGGCGGC CGCGACGCGT TTCGACGCGG CCGGCAATCA TCACGGCATC CTGCCCGGGC GCTGGTTCCA GCTGTCCGAT CACTTCAGCG TGGCGTCGGG CAGCCCGCAG GATCACGAGT ACCTGATTCT CGAAGCCCGT CACGAAGCGG CGAACAACTA CCTGCAGGCC GACGGCAAGC CCGAGTACCG CAACCGCTTC GTCGCGGGCC ATCGACGTAC GCCGTGGCGC CCGGGGCGCG GGTTCAACAG CGAACCGGTG CGCGTGCTGG CGCCGCAAAC CGCGACCGTT GCCGGCGCGA AGGGAGCCGG CAGCGTCGAC GTCGACGAAT ACGGCCGCGT CTGCATCGTC TATCACTGGG ATCGTGCGGC GCAGATCAGC GCGCGGATTC GCGTGGCCGC CGGCTGGGCG GGCGGCGAGA AGGGCATGAT CGCGCATCCG CGCGTGGGCA GCGAGGTGCT CGTGATGTGC CTCGACGGCA ATCCCGACCG GCCCGTCGTG TCGGGCACCA CGTACAACGC GGAACGGATG CCGCCGTGGG CGCTGCCCGA CCAGCACGTG CTGACCGGCC TGCGCAGTCG CGAGCTGTCG GGCGACGGCG GCAATGCGGC GGGCGGACGC TCGAACCACG TGCTGCTCGA CGACACGCCG CAGCAGCTCC AGCTGAAGCT GCGCAGCGAT ACCGACGCGA GCGAACTGAC GCTCGGGCAC AACGTCCGCA TCGACGCGAC CCAGGGGCGG ACCGATCAGC GCGCCCGCGG CTTCGAATTG CGGACCGACG CGCATGGCGC GGTACGGGCG GCCAAGGGCC TGCTCGTGAC CAGCGAGGCG CGCTACGACG CGCGTGCCCA TGCGACCGAC ATCGGCGAGA CCGTCGCGCG CCTCGACAAG GCGCACGACC TGCACGAATC GTTGTCGGGG TCCGCGCACG ACGTGAAGGC GCAGGAGTCC GGCGATCAGG ATGCCGTTCA TCAGGCGCTC AGAACGCAGA ACGACGGCCT GAGGGGTAGC GGCGGCAATC CGCAGCAGGG CGAGTTTCCG GAGTTCGCGC AGCCGTTCCT CGCGCTCGCC AGCCCGGCGG GGATTCTGGC GACGACGACG GGGTCGACCC ATGTCGCGAG CGACCAGCAC GTCGCGTTGA CGAGCGGCGC CCACACGAGC ATCGGCGCGG GCAAGAGCAT GCTGGTCAGC GCGCAGGAGG CGGTGCGCGT CGCCGCGTTC GAGAAGGGCA TCCGGCTCGT GGCCGCCGCG GCCGACATCG ACATCCAGGC GCTCAAGGAC AGCGTCAACG TGCTCGCCAA GCTGGACGTG AAGGTCGATG CGAACCGCAT CACCATCACT GCGAAGGAAG AAGTCCTGAT CAACGGCGGG ACCAGCTATA CGCGCTGGAA CGGCAGCGGC ATCGTGCACG GGACCAAGGG CGAATTCACC GCGCATGCCG CGTCGCATAC GTTCATCGGG CCGGACAGCC TGCCGGTGCC CGCGCGCGCG TTCCCCGGCA CGGCGTGCGC GCCGTGCATG GTCAACGCGG CATCGATGGC GTCGCCGTTC GCGGCCAAGG CGTGA
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Protein sequence | MADLAAFIRT PFFQQDKRLL ALSFPHDDAP SVTDSYGRQR PARLVAERLV AHEGLGIDFT FEVTLLSGEA GVTLADMLGK LLAVSMVRPD GGLRYFTGYC TEFSLVRNDD SVAEYRAVLR PWSHFLRTRV NNRLFLGQSL QQQIGTLLAD YQGLAPSWEW RVRGDDPART MNVQGGGLGE SDWNYIVRHL EAVGFLYWWE HDEKGVKLIV GDDSTVQCPA VDGRSPQIRF QTHDGPMAAD AISQWSAVRS LSAGSYSATA FDFKAPHAAH AQIPTLHPPG VAPQVEHHEY VGHYGFAKQT RAGDALARVR MEEIEAAATR FDAAGNHHGI LPGRWFQLSD HFSVASGSPQ DHEYLILEAR HEAANNYLQA DGKPEYRNRF VAGHRRTPWR PGRGFNSEPV RVLAPQTATV AGAKGAGSVD VDEYGRVCIV YHWDRAAQIS ARIRVAAGWA GGEKGMIAHP RVGSEVLVMC LDGNPDRPVV SGTTYNAERM PPWALPDQHV LTGLRSRELS GDGGNAAGGR SNHVLLDDTP QQLQLKLRSD TDASELTLGH NVRIDATQGR TDQRARGFEL RTDAHGAVRA AKGLLVTSEA RYDARAHATD IGETVARLDK AHDLHESLSG SAHDVKAQES GDQDAVHQAL RTQNDGLRGS GGNPQQGEFP EFAQPFLALA SPAGILATTT GSTHVASDQH VALTSGAHTS IGAGKSMLVS AQEAVRVAAF EKGIRLVAAA ADIDIQALKD SVNVLAKLDV KVDANRITIT AKEEVLINGG TSYTRWNGSG IVHGTKGEFT AHAASHTFIG PDSLPVPARA FPGTACAPCM VNAASMASPF AAKA
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