| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4481 |
|---|
| Symbol | |
|---|
| ID | 6127303 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | + |
|---|
| Start bp | 1455259 |
|---|
| End bp | 1456062 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641651578 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001778111 |
|---|
| Protein GI | 170736851 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCAGA CGAAGCAAAC GGCGCACGCG CCCGTCGTGC TCGTGACCGG CGCCGCGCGC
CGGGCCGGGC GCGCGTTCGC CGAGTATTTC GCCGCGCACG GCTATCGCAC CGCGGTGCAT
TACGACCGTT CGGCCGATGC CGCGCAGGCC GCCGCCCGCG CGATTGCCGA ACGCGGGCAC
GATTCGGTGG CGCTGCAGGC CGACCTGTCC GATGCCGCGC AGATCACCGC GTTGATCGAT
GCAGTCTATG CGCGCTTCGG CCGCCTCGAC GTGCTGGTCA ACAACGCGTC GGTGTTCTGG
CAGGACCATT TCCCGAGCTT CGATCTCGCC GCGTTCGACC AGGCGTGGGC CGTCAACTGC
CGCGCGCCGA TCCTGCTCAC GCGCGCGTTC TACGAGCGGG CTCGCGCGGC CGGCACGCAG
GGCGTCGTCG TGAACGTGGT CGACCAGAAG ATCAAGGAAA ACTTCCACCG CGACCATTTC
AGCTATACGG TCGCGAAGGC CGCGCTCGGC AACCTGACGC AGATGCTCGC GCTGTCGTCC
GCGCCGGTGC TGCGCGTGAA TGCGGTGTTC CCGGGGCTGA TGCTGCCGAG CGACGACCAG
ACGCAGGCCG ACTTCGAACA CGCGAGCCGC GCATCGACGC CGCTCGCGCG CATCGCGGGC
CCCGACGACG TCGCCAGCGC GATCCTGCTG CTGACGGGCA ATGCGTACAA CGGCGTGGAT
TTCGTCGTCG ATGCGGGCCA GAACCTGATC CGCGTCGATC AGGACGTGCT GTACAAGCAC
CGCTCGCCGG ACGGCAAGCA CTGA
|
|---|
| Protein sequence | MEQTKQTAHA PVVLVTGAAR RAGRAFAEYF AAHGYRTAVH YDRSADAAQA AARAIAERGH
DSVALQADLS DAAQITALID AVYARFGRLD VLVNNASVFW QDHFPSFDLA AFDQAWAVNC
RAPILLTRAF YERARAAGTQ GVVVNVVDQK IKENFHRDHF SYTVAKAALG NLTQMLALSS
APVLRVNAVF PGLMLPSDDQ TQADFEHASR ASTPLARIAG PDDVASAILL LTGNAYNGVD
FVVDAGQNLI RVDQDVLYKH RSPDGKH
|
|---|
| |