Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_4476 |
Symbol | |
ID | 6127298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 1450714 |
End bp | 1451370 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641651573 |
Product | 3-oxoacid CoA-transferase, B subunit |
Protein accession | YP_001778106 |
Protein GI | 170736846 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGAC TGACCCGCGA TGAAATGGCC AAGCGCGTCG CCCAGGACAT CCCCGAAGGC GCGTACGTCA ACCTCGGCAT CGGCGTGCCG ACGCTGGTGG CCAACCACCT CGACCCGAGC AAGGAGATCT TCCTGCACAG CGAGAACGGC CTGCTCGGCA TGGGCCCGGC GCCTGCGCCC GGCGAGGAAG ACGACGAACT GATCAACGCC GGCAAGCAGC ACGTGACGCT GCTCACCGGC GGCGCGTACT TCCACCACTC GGATTCGTTC GCGATGATGC GCGGCGGCCA CCTCGACTAC TGCGTGCTCG GCGCGTTCCA GGTGTCGGCG AACGGCGACC TCGCGAACTG GCATACCGGC GCGCCCGATG CGATTCCGGC CGTCGGCGGC GCGATGGACC TCGCGATCGG CGCGAAGCAG GTGTTCGTGA TGATGGAGCA CCTGACGAAG CAGGGCGAGA GCAAGGTCGT CGCGCAGTGC TCGTATCCAG TCACCGGCGT GCAATGCGTG AGCCGTATCT ATACCGATCT CGCCGTGCTC GACGTGACGG CCGACGGCCT CGCGGTGAGC GAGATCTTCA CCGACCTGTC GTTCGACGAG CTGCAGAAGC TGACCGGCGT GCCGCTGATC GACGCGACGC AGAAGGCCGC CGCCTGA
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Protein sequence | MKRLTRDEMA KRVAQDIPEG AYVNLGIGVP TLVANHLDPS KEIFLHSENG LLGMGPAPAP GEEDDELINA GKQHVTLLTG GAYFHHSDSF AMMRGGHLDY CVLGAFQVSA NGDLANWHTG APDAIPAVGG AMDLAIGAKQ VFVMMEHLTK QGESKVVAQC SYPVTGVQCV SRIYTDLAVL DVTADGLAVS EIFTDLSFDE LQKLTGVPLI DATQKAAA
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