| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4470 |
|---|
| Symbol | |
|---|
| ID | 6127292 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | + |
|---|
| Start bp | 1445407 |
|---|
| End bp | 1446024 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641651567 |
|---|
| Product | lysine exporter protein LysE/YggA |
|---|
| Protein accession | YP_001778100 |
|---|
| Protein GI | 170736840 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1280] Putative threonine efflux protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTCC TCACCCTCAG CGCGCTGCCC GCCGGCATGC TGTTCGCGCT CGTCACGTCG
ATCACGCCCG GCCCGAACAA CACGATGTTG CTCGCATCCG GCGTCAACTT CGGTTTCCGC
CGCACGATGC CGCACCTGTT CGGCATCAGC ATCGGCGTCG CGATCCTGAT GCTGTGCGTC
GGCTTCGGCC TCGGCGAAGC GTTCAAGCGC CTGCCGCTGC TGTACACGAT CCTCGAAGCC
GCGAGCGTCG CGTACCTGTT GTACCTCGCG TGGCGCATCG GCACGTCGGG CGAAGTGAAG
GCGCACGGCG CCAAGCCGCG GCCGATGACG TTCATCGAAG CCGCCGCGTT CCAGTGGGTC
AATCCGAAGG CGTGGATGAT GGTGCTGACC GCCGCGACGA CGATCCGGCT GTCCGCCGAC
TACGGGATGA ACGCCGCATG GATGTCCGTC GTGTTCATCC TGATCGGCTT CCCGTGCATC
TGCCTGTGGG CCGCGTTCGG CCTCGGCCTG CGCCGCTTCC TGTCGAATCC CCGCGCGCTG
CGCCTCTTCA ACGTGACGAT GGCCGTGCTG CTGATTCTGT CGCTGTATCC GCTCGTCGCC
CATTTGCTGC CGCAGTGA
|
|---|
| Protein sequence | MEFLTLSALP AGMLFALVTS ITPGPNNTML LASGVNFGFR RTMPHLFGIS IGVAILMLCV
GFGLGEAFKR LPLLYTILEA ASVAYLLYLA WRIGTSGEVK AHGAKPRPMT FIEAAAFQWV
NPKAWMMVLT AATTIRLSAD YGMNAAWMSV VFILIGFPCI CLWAAFGLGL RRFLSNPRAL
RLFNVTMAVL LILSLYPLVA HLLPQ
|
|---|
| |