| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4453 |
|---|
| Symbol | |
|---|
| ID | 6127278 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | - |
|---|
| Start bp | 1426584 |
|---|
| End bp | 1428458 |
|---|
| Gene Length | 1875 bp |
|---|
| Protein Length | 624 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641651553 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001778086 |
|---|
| Protein GI | 170736826 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAAAC GTTTGCGCAT GACGGATCGG TGGATCGGGT GGCTGCTTGC GAGTGTCGCG
CTCGCGGGAT TGATGAGCGC ATGCGGTTCG GGAGCGGATT CGGAGACGGC CGAACGCACC
GTGCTCGTCT ATATGGTTGG TTCGGATTTG AGTGATGACC TTCAGCGCGA TCTCGACGCG
ATGACCAGAG CGACGGCCGG CACGAAGGTG AATATCCTGG TCACCACCGG CGGCGGAGTT
CCGATAGCGG GGGATGCTGG CACGAAGCCA ATTGTCGACT GGACGCGGAC CCAACGCTGG
GAACTCGCGC AGGGGCAACG AATCAATCGG GGCGATCTGG GACAACAGGA CATGGCGGCA
TCGGATACGC TGCGCGATTT TCTCGAGTGG GGCGTTCGAA AATATCCGGC GAAGCGGATT
GCGGTTATTT TTAGCGATCA CGGGGGCGGA CCGAACGGCG GCTTCGGTTA TCGCACTACG
ACGCCTGCGG AAGACGAGAA GGGGAATAGA CCGCACTTGT CGTTGGAGGA TATGACATCG
GCGTTCAACG CTGCCACTAC CGCTACGGGC AAGCGCTTCG ATTTGATCGG GTTCGACGCA
TGCATGATGG CCAGTATCGA GGTCGCCGTC GCGTTCCGTC CGTATGCGGA CTACCTTGTT
GCATCGGAAG ATCTCGAGGT CGGCGGATGG AACTACGAGC GCGCATTTGG CGATCTCGTG
GCGCAACCGG GTATGGATGC TCGAGATCTG GGTACACGGA TCGTTGACAG CTATTACGAC
CTGCGTGGAG CAGACAACCC GGAGTTCACG ATTTCGCTCG TCGATCTGCA CGCGCTGGAC
AGTGTCATCG GCGTTATTGA CCGACTCGGG ACGACGCTTT ACGAGAACGG AAGCAGCGTA
GCGGACATCG CACGCGCACG CGTCGACGCA CGTTCGTTTG ATACCGACTG GGTCACCAGC
ACCGATCTGG TCGATCTGCT GCAGTTTTCA CGGGCACTGG AGTCTGTGGC ATTACCCGTG
CCGACAGTCG GAAGCAGCGT CGTCGAGCAG GCGCTGAGCG AGGCCGTTGT CGCCAAGCGT
GCGGGAAGCA ACCGGCCGTT GGCCAGCGGA TTGACGATCT TCATGCCGGC CGGCGCTGCA
TATGAGGATG CCACCATGAT GGTATACGGT AGCCTGGATT TTAGCGCTTC CTATCGACGG
TTTGTCGGCG AATACGGCCC CGCATTGAAG GCGGCACTTG ACGTGCTTAT CCAGATCTCG
CCGCCAGTTG CATCAGGCGA CGACGTCCAG GCATTCGCGT TTTCCCCGAA GCTCTGGCAG
GAGGCGGTAC CGATGGCGGC ACTTCGGGAT GACGCCGGGC AGGTCGTGGC GCTTCGTCCT
GTCGGGCCAG CATCGCCCGC CGTAGCAGGT GATGTGAACT TGGGAGGCGA ATTTCGCAAG
ATATCAACCA AGTCGTCGGA GCAGTGGTAT GCGCTCAATG GTTGCATCAT GTCAGTTCTT
CCGGGAGATG CTGATACGTC ATTTGTCATC CCCGTGTCCT ATAGCGACAA GCGTGGTGCT
TCCTATGTCG ACGGCTTCTT GTTGGTGTCG GGACAACGAG GGGGAGACCT GACGCTGAAT
GGCTTTGTTC AGAAGTTAGG TATTGCCGTT GGTCATGTGC AGGAGATTGG GGCGGAAGCG
ACGGTGGTGC CGAAGATCTG GTCTCCGACC GGGTCGGCAT GGGAGGCTCA GCCCTTGGAT
TCTGCGAGAT GCAAGGCGGT TGCGGCGGCA GGTAATAGCT GGAAAATCGG ACGGATCGAC
AAGCTTGATT CAGATCGATT CTCGTTTGCC GTGGCAGACT TGGCGAATCG CTTGCGTCTG
TCGCCTGCGC TGTGA
|
|---|
| Protein sequence | MQKRLRMTDR WIGWLLASVA LAGLMSACGS GADSETAERT VLVYMVGSDL SDDLQRDLDA
MTRATAGTKV NILVTTGGGV PIAGDAGTKP IVDWTRTQRW ELAQGQRINR GDLGQQDMAA
SDTLRDFLEW GVRKYPAKRI AVIFSDHGGG PNGGFGYRTT TPAEDEKGNR PHLSLEDMTS
AFNAATTATG KRFDLIGFDA CMMASIEVAV AFRPYADYLV ASEDLEVGGW NYERAFGDLV
AQPGMDARDL GTRIVDSYYD LRGADNPEFT ISLVDLHALD SVIGVIDRLG TTLYENGSSV
ADIARARVDA RSFDTDWVTS TDLVDLLQFS RALESVALPV PTVGSSVVEQ ALSEAVVAKR
AGSNRPLASG LTIFMPAGAA YEDATMMVYG SLDFSASYRR FVGEYGPALK AALDVLIQIS
PPVASGDDVQ AFAFSPKLWQ EAVPMAALRD DAGQVVALRP VGPASPAVAG DVNLGGEFRK
ISTKSSEQWY ALNGCIMSVL PGDADTSFVI PVSYSDKRGA SYVDGFLLVS GQRGGDLTLN
GFVQKLGIAV GHVQEIGAEA TVVPKIWSPT GSAWEAQPLD SARCKAVAAA GNSWKIGRID
KLDSDRFSFA VADLANRLRL SPAL
|
|---|
| |