Gene Bcenmc03_4381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_4381 
Symbol 
ID6127208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp1352862 
End bp1353695 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content67% 
IMG OID641651483 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001778016 
Protein GI170736756 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACGAC TGATGGCCCG CCGCGGCCCC GCCGCCGCCA CTGCTTCCAC CGTCGCGATC 
GCCGGCGCGA TCCTGCTCGT CGCCGCGTTC CCGCTGTTCT GGGCCGTGCT CAATTCGCTC
AAGCACCTGC TCGACATCGT CACGCCGACG CCGCGTTTCT TCTTCACGCC GACGCTCGCG
AACTACGAAC AGGTGCTGTC GAGCCCCGAG GTGCTGATCG GGCTCGGCAA CAGTATCGCG
ATCGTCGGCG CGGCGGTACT GATCGGCGCC GTGCTCGGCG TGCCGGCCGC GTATGCGATC
GCGCGCTACC CGATACGCGG CAAGCGCGAC ATCCAGTTCT TCCTGCTGTC GCTGCGCTTC
CTGCCACCCG TCGCGGTCGC GCTGCCGCTG ATCGCGATCT GGGTCGATCT CGGGCTGTAC
GACACGAAGC TGTCGATGAT CGTCACGTAC CTGCTCGTCA CGCTGTCGAC CATCACGTGG
CTGTCGATCC CCGTGTTCCG CCGGCTGCCG CGCGAGATCG AGGAAGCCGC CGCGCTCGAT
GGCTACGGCC CGTACGCGGT GTTCTGGCAT ATCGCGCTGC CGGTGTGCGC GAGCACGCTG
CTCGGCGGCA TCGTGTTCAG CTTCGTGCTG GTGTGGAACG AACTGATGAT CGCGCTCGCC
CTCACGTCGT CGCGCAGCGC GACGCTGCCG GTGGTCGCGT CCGCGTTCAC GTCGCTCGGC
CAGGAAGTGC CGTGGGGCGT GATCAACGCG TCGACGGTGC TGCTCGCGCT GCCGCCGCTC
GTCTTCGTCG GCATGCTGAG CCGGCTGCTC AACTCGATGG TCAAGGGAAA ATAA
 
Protein sequence
MGRLMARRGP AAATASTVAI AGAILLVAAF PLFWAVLNSL KHLLDIVTPT PRFFFTPTLA 
NYEQVLSSPE VLIGLGNSIA IVGAAVLIGA VLGVPAAYAI ARYPIRGKRD IQFFLLSLRF
LPPVAVALPL IAIWVDLGLY DTKLSMIVTY LLVTLSTITW LSIPVFRRLP REIEEAAALD
GYGPYAVFWH IALPVCASTL LGGIVFSFVL VWNELMIALA LTSSRSATLP VVASAFTSLG
QEVPWGVINA STVLLALPPL VFVGMLSRLL NSMVKGK