Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_4346 |
Symbol | |
ID | 6127173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 1309970 |
End bp | 1312735 |
Gene Length | 2766 bp |
Protein Length | 921 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641651448 |
Product | ATP-dependent transcription regulator LuxR |
Protein accession | YP_001777981 |
Protein GI | 170736721 |
COG category | [K] Transcription |
COG ID | [COG2909] ATP-dependent transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.815962 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCCGA CGGACAGCAG ACAACCGGCT CGCCCGCCGG ACACCGATGC GATCGAAGTG CTGGTGCGCA CCAAGCTGGC GCCGGCGTCG ACCCGCGGGA TCGTGACGCG CATCGCGCGG CTCGGGCGGC TCAGGCGCTG CCTCGACCGC CGGCTGACGC TCGTGAGCGC GCCGGCCGGT TACGGCAAGA CCACGCTGCT GGCCGAGTGG CGCCATGCGC TGGTGGCGTC GGGTGTGAAG GTCGCGTGGG TGAGTCTCGA CCAGGACGAC GACAACGCGT CGATCTTCGC GTCATACGTG GTCGCCGCGA TCGTCGACAC GACCGGCGGG GTCGGCGCCC GCGCGCAGCA GTTGTTGCGC GATCGCGCGC TGATTCCGCT GAAGACCGTA TTCGACGAAC TGCTCAACGA ACTGGACAGC GCGGGCGTCG AGCTGTTCCT GATGCTCGAC GACTTCGATC GCCTCGCGTC GCCGGTCATC CACGACGCGA TGTTCGATCT GCTGCGCTAC GCGCCGTCGA ACCTGCATGT CGTGCTGTCG TGCCGCTCGG CGCCCGCGTT GCCGCTCAGC TATTTCGAAT CGCGCGACGA ACTCGTGCGG GTGGACGAGA ACGACCTGCG TTTCGACGAC GCGGAGACGC GCGCGTTCTT CGAGCGGGTG GCCGGCAAGC CACTCAATGC GGACAACGTC GGGCGCCTGC GCGCGGCGAC CGAAGGCTGG GTGTCGGGCC TGCAACTGGC GGCCCTGGCG CTGCACGACG ACAGCGACGC GGCGCGCGTG GCCGAGCAGG TCAGTCACGC GCGTGCCGGC ATCGCCGCGT ACCTGAACGA GAACGTGATG ACGCAGGTGC CGGACGCGAT CCGCCACTTC CTGCTGCATA CGGCGGTGCT CGACCGGATG ACGCCGGCGC TGTGCGATGC GCTGACCGGC CGCGACGATG CGCTTGACTG TCTCGAATGG CTAACCGCGC ACAACCTCTT CATCCGGTCG ATCGACGGCG ACCGCCGGCG CTACCGCTAT CACGCGCTGT TCCTGCAATA CCTGCGGGAG GAGCTGGCGC TGCGCGAGCC CGGCGCGGTG GCCACGCTGC ATCGCCGCGC GAGCGCGTGG TATGCGGCCG AGCGGCAATG GCCGGACGCC GTCAGGCACG CGCTCGCGGC CGGCGACTTC GATGCGGCCG CCGGCTGGGT CGAGGCGTGC GCGATGAAGC TCATCGCGTC GAGCGACGTG CGTACCGTGC TCGACTGGGT GTCGCGCCTG CCCGCGCAGG CGCTGACGGG CCGCCTGCGG TTGCGGATCG CGCATACGTG GGCGCTCGCG CTGTCGATGC AGATCGTCGA TGCGCGCCAT GCGCTGGAAG CGCTGGAAGC CGACATCGCG GCCGGGCGGC TCGATACCGA CACGGTTACG GCGACCGAAC TGCTGGCCGT GCGCTCGCTG ATCGCCGGGC TGTCGGATCG CAGTATCGAA TCGCTGCAGC TCGGCGAGCG TGTGCTGGCG GCCGCCCCAC CGGCCGGTTC GTGGGTCGAG CAGATCGGGC AGACGACGCT GATCTTCGGG CTCGGCTACG CGGGCCGCCT CGGCGACGTG CGGGATCTCG GCGCGCGCGC GGAACACGCG GCGTCGGGGC ACGAGCCGCT GTACGCGAAC GTGTACCGCC AGAACATGTC GGGCCTGGCC GAGTTCGTCG CCGGGCGGCT GCACGACGCG TCGAAGACGT TCGAGACGGC GTTGCGCGCC GCCGAACGCT CGGCGGGTCG CCTGTCGGCG GCGACGGCGC TGTCGGCCGG CTATCTGTCG GCGATCTACT ACGAATGGAA CGACTGGGCG AAGGTGCGCG ACGCGCAGGC CGACCGCTTC GACATCGCGA TGCAGGCCTG TTCGCTCGGG CCGTTGCTGA GGTTCATGCA GACCGCCGCC CTGCTGCAAT TCCGGTCGGG GAACGACGCG CGGGCACACG ACATGCTCGA CGAAGCCGAT CGCATCGCGT GCAGCCGGCA ATGGCTGCGG CTGCGCGTCG CGTGCATGGC GACCGGTATC CGGCTGCATC TGGACGCCGG CCAGCCGACG CAAGCCCACC GTGTGGGGCG CGCGCTGGCG TCGCTGGTGT CGCCCGTGCC GCCGGACGAA GCGTCGAGCC ACGTCGAGAC GTGGCAGATG GCGCAATCCG CGCAGGCAAG GCTGCTGCTC GCCGATGCAC GCGCGAACGA AGCCGCGCAG CGCATGGCGA CCGTGCACGC GGTGCTGGCC GCGCGCGGGT TCGACTGGTT CGCGGCGCAG GCCGCCGTGT TGCATGCGAT CGCGCTCGAC CACGCGGGCG ACGAAAGCGC GGCGCTCGCG GCGTTCGCGC GTGCGCTCGA ATACGGCCAG GGCAACGGAC TCGTCCGCAC CTTCGTCGAC GAAGGCGCGG CGGCCGAGCG CCTGCTGGCG CGCATGCAGA AGCGTGCCGA CCGCTTTCCG GCAGTCGGCG CGTGGTATCT GCGCGACCTG GCCCGTGCGT TCGACGCGCA GCGGGCGTCG GGCGGGGCAC CGGCCACGCG GCCGGGTGCG ACCGGCAACC TCAGCGCGCG GGAGCTCGAG ATCCTCGACT ACGTCGCGCG TGGCCTGTCG AACAAGGAAA TCGCCCGCGC GCTGCGCGTC GCGCCGGAGA CGATCAAGTG GCACCTGAAG AACATCTTCG AGAAGCTCAA CGTGACGTCG CGCATCCAGG CGGTGCGCAG CGGGCTGGCG CTCGATCCGT CACGCGTGCG GCGCGACGAC GAATGA
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Protein sequence | MAPTDSRQPA RPPDTDAIEV LVRTKLAPAS TRGIVTRIAR LGRLRRCLDR RLTLVSAPAG YGKTTLLAEW RHALVASGVK VAWVSLDQDD DNASIFASYV VAAIVDTTGG VGARAQQLLR DRALIPLKTV FDELLNELDS AGVELFLMLD DFDRLASPVI HDAMFDLLRY APSNLHVVLS CRSAPALPLS YFESRDELVR VDENDLRFDD AETRAFFERV AGKPLNADNV GRLRAATEGW VSGLQLAALA LHDDSDAARV AEQVSHARAG IAAYLNENVM TQVPDAIRHF LLHTAVLDRM TPALCDALTG RDDALDCLEW LTAHNLFIRS IDGDRRRYRY HALFLQYLRE ELALREPGAV ATLHRRASAW YAAERQWPDA VRHALAAGDF DAAAGWVEAC AMKLIASSDV RTVLDWVSRL PAQALTGRLR LRIAHTWALA LSMQIVDARH ALEALEADIA AGRLDTDTVT ATELLAVRSL IAGLSDRSIE SLQLGERVLA AAPPAGSWVE QIGQTTLIFG LGYAGRLGDV RDLGARAEHA ASGHEPLYAN VYRQNMSGLA EFVAGRLHDA SKTFETALRA AERSAGRLSA ATALSAGYLS AIYYEWNDWA KVRDAQADRF DIAMQACSLG PLLRFMQTAA LLQFRSGNDA RAHDMLDEAD RIACSRQWLR LRVACMATGI RLHLDAGQPT QAHRVGRALA SLVSPVPPDE ASSHVETWQM AQSAQARLLL ADARANEAAQ RMATVHAVLA ARGFDWFAAQ AAVLHAIALD HAGDESAALA AFARALEYGQ GNGLVRTFVD EGAAAERLLA RMQKRADRFP AVGAWYLRDL ARAFDAQRAS GGAPATRPGA TGNLSARELE ILDYVARGLS NKEIARALRV APETIKWHLK NIFEKLNVTS RIQAVRSGLA LDPSRVRRDD E
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