Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_4337 |
Symbol | |
ID | 6127164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 1302927 |
End bp | 1303691 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641651439 |
Product | short chain dehydrogenase |
Protein accession | YP_001777972 |
Protein GI | 170736712 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.351229 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.909494 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACGA ACCTGTTCGA CCTGACGGGC AAGATCGCAC TGGTGACGGG CGCGAGCCGC GGCATCGGCG AGGAAATCGC CAAGCTGCTC GCGGAGCAGG GCGCGTACGT GATCGTGTCG AGCCGCAAGC TCGACGACTG CCAGGCGGTT GCGGACGCAA TCGTCGCGGC GGGCGGTCGC GCCGAAGCGC TGGCATGCCA CGTCGGGCGG CTGGAGGACA TCGCCGCGAC GTTCGAGCAC ATCCGCGGCA AGCACGGCCG CCTCGACATC CTCGTGAACA ACGCTGCCGC GAACCCGTAT TTCGGGCACA TCCTCGATAC CGATCTCGCC GCGTACGAGA AGACCGTCGA CGTGAACATC CGCGGCTACT TCTTCATGTC GGTCGAAGCC GGCAAGCTGA TGAAGACGCA CGGCGGTGGC GCGATCGTCA ACACGGCATC GGTGAATGCG TTGCAGCCGG GCGACCGGCA GGGCATCTAT TCGATCACGA AGGCGGCCGT CGTCAACATG ACGAAGGCGT TCGCGAAGGA ATGCGGGCCG CTCGGCATCC GCGTGAACGC GCTGCTGCCG GGGCTGACGA AGACGAAGTT CGCGGGCGCG CTGTTCGCGG ACAAGGACAT CTACGAAACC TGGATGACGA AGATTCCGCT GCGCCGCCAC GCGGAGCCGC GCGAAATGGC CGGCACCGTG CTGTATCTCG TGTCGGACGC GGCGAGCTAT ACGAACGGCG AATGCATCGT CGTCGACGGC GGCCTGACGA TCTGA
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Protein sequence | MATNLFDLTG KIALVTGASR GIGEEIAKLL AEQGAYVIVS SRKLDDCQAV ADAIVAAGGR AEALACHVGR LEDIAATFEH IRGKHGRLDI LVNNAAANPY FGHILDTDLA AYEKTVDVNI RGYFFMSVEA GKLMKTHGGG AIVNTASVNA LQPGDRQGIY SITKAAVVNM TKAFAKECGP LGIRVNALLP GLTKTKFAGA LFADKDIYET WMTKIPLRRH AEPREMAGTV LYLVSDAASY TNGECIVVDG GLTI
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