Gene Bcenmc03_4320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_4320 
Symbol 
ID6127147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp1284681 
End bp1285634 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content67% 
IMG OID641651422 
ProductLysR family transcriptional regulator 
Protein accessionYP_001777955 
Protein GI170736695 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.279054 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0097659 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTATTCAC TTATAGGAAA GACCGCGACG TTCCGGCAGT TGAAGGCGCT GGACATGATT 
GCGCGGCTCG GCAGCGTGTC GCGCGCGGCC GAGGAGCTGA ACCTGACGCA GCCGGCCGTG
TCGCTGCAGG TTCGCCTGCT CGAGGAGGCC GTGGGCGCTG CATTGCTACA GCGGGTGGGG
CGTGGCGTGC AACTGACCGC GGCCGGCGAG ATCGTGGCGC GCTACGCGCG CGAGATCCTG
CATCTGTGGA GCGAGGCCGG CGACGAAGTG GCCGCGTTGA CGGGCGATCT CGGCGGCACG
CTGCGGATCG GCGCGATCAC GACGGCCGAA TACCTGATCC CGCCGCTGCT CGTCAAATTC
ACCGCGACGC GCCCGCACGT GAAGACCTAT TTCAAGGTCG GCAACCGCGA CGACATCATT
CGCATGCTCG CGACGCATGA AATCGATCTC GCGGTGATGG GCAGCGCGCC GAAGGAGCTG
CGCACGCACG CGGTCGAGTT CGCGAAGCAT CCGATGGTGT TCGTCGCGGC GCCCGGCCAT
CCGCTGATGC AGCGCAAACG CGTCGCGCTG AAGGATCTCG AATCCGCGCA CCTGCTCGTG
CGCGAACGCG GCGCGGGCAC GCGCTCGACC GTCGAGAGCC TGTTCAAGAA CGCGGGCCAC
CGCTTTCATG TGGGCTCCGA ACTGTCGAGC AACGAGGCGA TCAAGCAGAT GGCCGAAGCC
GGGCTTGGCG TCGCGTTCCT GTCGTTGCAC GCGTGTGCGC TCGAACTGCG CACGGGGCTG
CTCGGGCAAC TGCCGTTTCC CGGCAATCCG ATCGAGCGCG AATGGTATGT GGTCACGCTC
GCCGACCGGC GGATTTCGCA GGTGACGGGG CTGTTCCGCG ACTTCCTGAT CAAGCAGGGC
GCACCGGTGA TCGACGGCGC GACGGTGGCG CCGCACGAGC GGCGGCGCAA ATAG
 
Protein sequence
MYSLIGKTAT FRQLKALDMI ARLGSVSRAA EELNLTQPAV SLQVRLLEEA VGAALLQRVG 
RGVQLTAAGE IVARYAREIL HLWSEAGDEV AALTGDLGGT LRIGAITTAE YLIPPLLVKF
TATRPHVKTY FKVGNRDDII RMLATHEIDL AVMGSAPKEL RTHAVEFAKH PMVFVAAPGH
PLMQRKRVAL KDLESAHLLV RERGAGTRST VESLFKNAGH RFHVGSELSS NEAIKQMAEA
GLGVAFLSLH ACALELRTGL LGQLPFPGNP IEREWYVVTL ADRRISQVTG LFRDFLIKQG
APVIDGATVA PHERRRK