Gene Bcenmc03_4317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_4317 
Symbol 
ID6127144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp1282237 
End bp1283187 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content69% 
IMG OID641651419 
ProductNmrA-like protein 
Protein accessionYP_001777952 
Protein GI170736692 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0010584 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCGCACCT TCCCGGCCGC GCAACCCGAC AATCACAGCA CCTTCATCCC TCAGGAGCGA 
ACCGTGTTCG TGATCTTCGG AGCATCCGGC AACGTCGGCC TGGCCACCGC GACGACCTTG
CGCAACACAG GCTATTCCGT GCGCGCGGTA CTGCGCGACG CGCGCCGTCG TGAACGTTTC
GTGCGGCTCG GCTGCGATGT CGCGATCGTG GACCTGACGG ACGCGAACGC GATTGCCGCG
GCGATCGACG GCGCGCAGGC TGTGCAGATG CTGTGCCCGG TGCCGGCCGC CGATCCCGAT
CCGGCCACGA CGATGATGCG GACGATCGAC GTCGCGACCG CCGCGCTCGC CGCGAATCCG
CCACCGGCGC TGCTCGCGTT GTCGGATTAC GGCGCGGAGC TTGAAGGCAA TACGGGTATC
ACGCGTCTGT TCCATGACTT CGAGGAACGT CTGAAGACGA TCCCGACGCA GCTGACGCTG
CTGCGCTCGG CCGAGCATCT GCAGAACTGG GCGCGCGTGT TGCCGGTCGC ACTCGGTACC
GGTGTGCTGC CGAGCTTCCA TCACCCGGTC GGCAAGGTGT TTCCGACGGT CTGGGCGCCC
GACGTGGGCG TCGTCGCGGC GCGGCTGCTG CTCGATGCGC CGGAAGGCGG CAGGGGGCCG
CGTATCGTCA GCGTCGAAGG GCCGCGGCGG GTGAGCGTGA CGGCGCTCGC GGAGACGTTG
GGCGCGGTGG CAGGCCGCGC GATCGTCGCG CACGAGCTGC CGCGCGATAC GTGGAACGCG
ACACTGCTGC GCGCCGGGCT CAGCGAACGT CATGCACAGC TGATCGTCGA TCTGTATGAC
GTGCACAACG CGGGGCGGAT CGATGTGGAT GACAGGGCGT CGGAGCGGGC GTACGGAACG
ACATCGCCGG AGGAAGCGCT TGCGCAACTG GTGCGCCGGC ATGCGCGTTG A
 
Protein sequence
MRTFPAAQPD NHSTFIPQER TVFVIFGASG NVGLATATTL RNTGYSVRAV LRDARRRERF 
VRLGCDVAIV DLTDANAIAA AIDGAQAVQM LCPVPAADPD PATTMMRTID VATAALAANP
PPALLALSDY GAELEGNTGI TRLFHDFEER LKTIPTQLTL LRSAEHLQNW ARVLPVALGT
GVLPSFHHPV GKVFPTVWAP DVGVVAARLL LDAPEGGRGP RIVSVEGPRR VSVTALAETL
GAVAGRAIVA HELPRDTWNA TLLRAGLSER HAQLIVDLYD VHNAGRIDVD DRASERAYGT
TSPEEALAQL VRRHAR