| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4300 |
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| Symbol | |
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| ID | 6127128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 1257172 |
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| End bp | 1258881 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641651403 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_001777936 |
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| Protein GI | 170736676 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.3234 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAGA ACCCCGCGAC GAAATACCGA CCGTTCACGC CCGTCAACCT GCCCGACCGC
ACGTGGCCGT CGCGCACGAT CACGCAGGCG CCGATCTGGA TGAGCACCGA CCTGCGCGAC
GGCAACCAGG CGCTGTTCGA ACCGATGGAC GCCACGCGCA AGATGCGGAT GTTCAAGACG
CTGGTGGCGA TCGGCTTCAA GCAGATCGAG GTCGCGTTCC CGTCCGCGTC CGAAACCGAT
TTCAATTTCG TCCGCGAACT GATCGAGGGC GGCCACATTC CCGACGACGT GACGATCGAA
GTGCTGACGC AGGCGCGCGA CGACCTGATC GAGCGCACCT TCGCATCGCT GCGCGGCGCG
AAGCGCGCGA TCGTGCACCT GTACAACGCG ACCGCGCCGG AATTCCGCAA GATCGTGTTC
AACCTCGATC GCGACGGCGT GAAGCAACTG GCGGTGAACG CGGCGCGCAC GATCAAGCGG
TGCGCCGATG CGGCGACCGA CACGCAATTC ACGCTGCAGT ACAGCCCGGA AACATTTACC
GCGACCGAAC TCGATTTCGC GAAGGAAGTG TGCGACGCGG TGTTCGACGT GTGGCAGCCG
ACGCCCGAGC GCAAGTCGAT CGTGAACCTG CCGGCCACGG TGGAAATCGG CACGCCGAAT
TACTACGCGG ACCAGATCGA ATGGATGCAC CGCAACCTCG CGCGCCGCGA TTCGCTGATC
CTGTCGGTGC ACCCGCACAA CGACCGCGGC ACCGCGGTCG CGGCGGCCGA ACTCGCGGTG
ATGGCTGGCG CCGACCGGAT CGAGGGCTGC CTGTTCGGCA ACGGCGAACG CACGGGTAAC
GTCGATCTCG TGACGCTCGC GCTGAACCTG TACACGCAGG GCGTCGATCC GGGCCTCGAT
TTCTCGCAGA TCAACGAAGT GGCGCGCACG TCCGAGGAAT GCACGCAGTT GCCGGTCCAC
CCGCGTCATC CGTATGTCGG CGACCTCGTG TTCACCGCGT TCTCCGGCTC GCACCAGGAC
GCGATCAAGA AGGGCTTCGC GGTACAGCGC GCCGACACCG TATGGGAAGT GCCGTACCTT
CCGATCGATC CGAACGATCT CGGCCGCACG TACGATTCGA TCATTCGGGT GAACAGCCAG
TCGGGCAAGG GCGGGATCGC GTACCTGCTC GAACAGGGCT ACGGCGTCGC GCTGCCACGC
CGCATGCAGG TCGATTTCAG CGCGGCCGTG CAGCGCCTGA CCGACGAGAG CGGGCACGAG
GTGACGAGCG CGCAGATCTG GGCGCTGTTC CAGCAGGAAT ACGTCGAAAG CGACACGCCG
CTGCGTTACG TCAGCCATGA GCTGACCGAG CGCGACGGCC GCGAGACGAT CGTGCTGACC
GCCGACGTGC ACGGCGAGCG CCGCGTGCTG CGCGGTGAAG GCAACGGCCC GCTCGACGCG
CTGATGCATG CATTGCACAC GCCGCTGCGG ATCCAGCATT ACGAGGAACG CGCGCTGTCG
CAGGGCGCCG ATGCGAAAGC GATCGCGATC GCCGAGCTGG CCGGTACGGG CGTGCGCGGC
AGCGCGTTCG GCGTCGGCGT CGATGCGAAC CTGACGACCG CGTCGATTCG TGCGGTGATC
AGCGGCGTGA ACCGCGCGTA TGCCCGTGCG GATGAAGTTG TGCAGGCAAC CTTCTTTGCC
GAGCAGCCGG CGGCGCAGGC CGTCGCATAA
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| Protein sequence | MLKNPATKYR PFTPVNLPDR TWPSRTITQA PIWMSTDLRD GNQALFEPMD ATRKMRMFKT
LVAIGFKQIE VAFPSASETD FNFVRELIEG GHIPDDVTIE VLTQARDDLI ERTFASLRGA
KRAIVHLYNA TAPEFRKIVF NLDRDGVKQL AVNAARTIKR CADAATDTQF TLQYSPETFT
ATELDFAKEV CDAVFDVWQP TPERKSIVNL PATVEIGTPN YYADQIEWMH RNLARRDSLI
LSVHPHNDRG TAVAAAELAV MAGADRIEGC LFGNGERTGN VDLVTLALNL YTQGVDPGLD
FSQINEVART SEECTQLPVH PRHPYVGDLV FTAFSGSHQD AIKKGFAVQR ADTVWEVPYL
PIDPNDLGRT YDSIIRVNSQ SGKGGIAYLL EQGYGVALPR RMQVDFSAAV QRLTDESGHE
VTSAQIWALF QQEYVESDTP LRYVSHELTE RDGRETIVLT ADVHGERRVL RGEGNGPLDA
LMHALHTPLR IQHYEERALS QGADAKAIAI AELAGTGVRG SAFGVGVDAN LTTASIRAVI
SGVNRAYARA DEVVQATFFA EQPAAQAVA
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