| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4287 |
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| Symbol | |
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| ID | 6127115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 1241282 |
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| End bp | 1242406 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641651390 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001777923 |
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| Protein GI | 170736663 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0584309 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.408904 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGA CTGCCGTACC CGAAAAAGCC AAAACCGCCC GGTTTTCCCG GCGCCAACTG
ATCGCCGCGG GCGTCGTGCT CGCCGTCATC GCGCTCGCCG TGTTCGGCTG GCACTGGTGG
ACCGTCGGCC GTTTCATCGA AAGCACCGAC GACGCATATG TCCGCGCCGA CGTCGTGACC
GTCAGCTCCC GCGTGTCGGG TTACGTCACG CAGGTCGCCG TCGACGACAA CCAGCCGGTG
AAGCGCGGCG ACGTGCTCGT GCGGCTCGAC GACCGCGACT ATCGCGCGAA GGTCGACGAT
GCGCAGGCCG CCGTCGCGGC GGCCGACGCG ACGCTGCAGG CCGAGCAGGC GGCGGCCGCG
ACGCTCGACG CGCAGATCGG CCAGCAGCGC AGCCAGATCG CGCAGGCCGA CGCCGATGCG
GCCGCCGCGC GCGCCGAAGC CGCGCGGCGC GACGCCGATG CGACGCGCTA CAAGCAACTG
CTGGCCGAAT CCGCCGCGAG CGGACAGCGC TGGGAGCAGG CCCACGCGGA CGCATTGAAG
GCGCGCGCCG AACTGACTCG CGCCGGCGCG GCCGTGCGGG TGCAGACCGA CCAGCAGACC
GTGCTGCAGC GCCGCCGCGA ACAGAGCACC GCGGCGATCG CGCAGGCGCG TGCCCGGCTT
GCAGCGGCCC AGGCGAAGCT GGCGCTCGCG CAGCTCGATC TCGACCATAC GGTGATCCGG
GCGACGCGCG ACGGCAGCGT CGGCCAGCGC GCGGTGCGGG CGGGCCAGTA CGTCGAAGTC
GGGATGCCGC TGCTCGCGGT GGTGCCGCTG AGCGACGTGT ACGTCGTCGC GAACTTCAAG
GAAACGCAGC TCGGCGCGAT GCACGACGGC CAGCCCGTCC AGATCGACGT CGACACCTAT
TCGGGCCATA CGCTGCACGG CCGCGTGATC GGCCTCGCGC CGGGCTCGGG CGCGCAGTTC
GCGCTGCTGC CGCCGGACAA CGCGACCGGC AACTTCACGA AGATCGTGCA GCGCATCCCG
GTGAAGATCC GCGTCGATGC GCCGCCGGCC GGCGTCGTGC TGCGGCCCGG GATGTCCGTG
ATCGCGCGCG TCGACACGCG CGGCACGCAG GGGGCCGGCA CGTGA
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| Protein sequence | MSTTAVPEKA KTARFSRRQL IAAGVVLAVI ALAVFGWHWW TVGRFIESTD DAYVRADVVT
VSSRVSGYVT QVAVDDNQPV KRGDVLVRLD DRDYRAKVDD AQAAVAAADA TLQAEQAAAA
TLDAQIGQQR SQIAQADADA AAARAEAARR DADATRYKQL LAESAASGQR WEQAHADALK
ARAELTRAGA AVRVQTDQQT VLQRRREQST AAIAQARARL AAAQAKLALA QLDLDHTVIR
ATRDGSVGQR AVRAGQYVEV GMPLLAVVPL SDVYVVANFK ETQLGAMHDG QPVQIDVDTY
SGHTLHGRVI GLAPGSGAQF ALLPPDNATG NFTKIVQRIP VKIRVDAPPA GVVLRPGMSV
IARVDTRGTQ GAGT
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