| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4274 |
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| Symbol | |
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| ID | 6127104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | + |
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| Start bp | 1228920 |
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| End bp | 1230128 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641651379 |
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| Product | pyridoxal-dependent decarboxylase, exosortase system type 1 associated |
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| Protein accession | YP_001777912 |
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| Protein GI | 170736652 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR03099] pyridoxal-dependent decarboxylase, exosortase system type 1 associated |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0000282467 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATCGAT CATTGACCCG CCGCCATGAC GTCCTGTTCG CCGACAGTAT CGATGTCACA
CGGCTTGCCA ATCGTGCAGG TTCCACACCC TTTTTCGTCT ATGCGCGCGC CGCAATCGAT
GCCCGCGTGT GCCAGTTGCG TGCAAAACTG CCGGCGTCGA TACAGTTGCA TTACTCGATC
AAGGCCAACC CAATGCCTGC TGTCGTACAC CATCTGGCCA TGCGAATCGA CGGCTTTGAC
GTGGCCTCCG GCGCCGAGTT GGCATTGGCA CTCAACGCAG GCATGCCGCC TGATCAGATC
GGCTTTGCAG GTCCGGGCAA AACACGTGAG GAGCTACGGT GTGCAGTGGC CAGCGGCGTG
AACGTGCATA TCGAATCGCT CACTCAACTG CATCTGCTGG CAGCCCTTGG CTGGGAGCAG
GGCCTGCGCC CACGCGTGAC AATTCGCGTG AACCCGGATT TTCAGATCAC GCATGCCGGC
ATGCGCATGG GTGGGGGAGC AACTCAGTTC GGCATCGACG CCGAACAAGT CCCGGCACTA
CTGCAAGAAC TGAGCACATG TGACGTGACA CTGGCAGGTT TTCACGTCTT CTGGGGTTCG
CAGTGCCTGC GCCCGGCTAC CGTCGTCGAA GCACAGCGGC GCAGTGCCGA GCTCGTCATG
AAGCTCGCAT CCGATTTGCC ACTGCCGCCC CGGTACGTGA ATCTGGGCGG CGGTTTTGGC
ATTCCCTATT TCGAAGGCGA AGTACCGCTC GATCTCGATG CCGTCGCCCA GCCAATGCAC
GCTTGGCTCT CGCGCATGCA CCGCGCTTTG CCCGGTGTGC GCCCCGTGCT CGAATTCGGG
CGTTACTTGG TCGGCGAGGC CGGTGCCTAT GTATGCCGTG TCATCGATCG AAAAGTTTCA
CGCGGCACCA CCTTCCTTGT CACCGACGGC GGCCTGCACC ACCACCTCGC GGCCTCGGGC
AACTTCGGGC AGGTACTGCG CCGCAATTTC CCGGTGGTAC TCGGCAATCG GCTCGGCGAT
ACACCGACTG AGCGATGTCA CATCGTCGGC TGCTCGTGCA CTCCGCTTGA TCGCATCGTC
GACGACGTGC TGCTCCCCGA AGCTCACATT GGCGACTTCG TTGTCGTTCT GCAATCGGGC
GCCTACGCGC GCTCGGCAAG TCCCCGGGAT TTCCTCGGTC ATCCCGAAGC AATCGAGATG
CTCGTCTGA
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| Protein sequence | MNRSLTRRHD VLFADSIDVT RLANRAGSTP FFVYARAAID ARVCQLRAKL PASIQLHYSI
KANPMPAVVH HLAMRIDGFD VASGAELALA LNAGMPPDQI GFAGPGKTRE ELRCAVASGV
NVHIESLTQL HLLAALGWEQ GLRPRVTIRV NPDFQITHAG MRMGGGATQF GIDAEQVPAL
LQELSTCDVT LAGFHVFWGS QCLRPATVVE AQRRSAELVM KLASDLPLPP RYVNLGGGFG
IPYFEGEVPL DLDAVAQPMH AWLSRMHRAL PGVRPVLEFG RYLVGEAGAY VCRVIDRKVS
RGTTFLVTDG GLHHHLAASG NFGQVLRRNF PVVLGNRLGD TPTERCHIVG CSCTPLDRIV
DDVLLPEAHI GDFVVVLQSG AYARSASPRD FLGHPEAIEM LV
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