| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4250 |
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| Symbol | |
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| ID | 6127081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 1206829 |
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| End bp | 1208541 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641651356 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_001777889 |
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| Protein GI | 170736629 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00901664 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGCTGA AGAACCCCGC GACGAAATAC CGACCGTTCA CGCCCGTCAA CCTGCCCGAC
CGCACGTGGC CGTCGCGCAC GATCACGCAG GCGCCGATCT GGATGAGCAC CGACCTGCGC
GACGGCAACC AGGCGCTGTT CGAACCGATG GACGCCACGC GCAAGATGCG GATGTTCAAG
ACGCTGGTGG CGATCGGCTT CAAGCAGATC GAGGTCGCGT TCCCGTCCGC GTCCGAAACC
GATTTCAATT TCGTCCGCGA ACTGATCGAG GGCGGCCACA TTCCCGACGA CGTGACGATC
GAAGTGCTGA CGCAGGCGCG CGACGACCTG ATCGAGCGCA CCTTCGCATC GCTGCGCGGC
GCGAAGCGCG CGATCGTGCA CCTGTACAAC GCGACCGCGC CGGAATTCCG CAAGATCGTG
TTCAATCTCG ATCGCGACGG CGTGAAGCAG CTGGCGGTGA ACGCGGCGCG CACGATCAAG
CGGTGCGCCG ATGCGGCGAC CGACACGCAA TTCACGCTGC AGTACAGCCC GGAAACGTTT
ACCGCGACCG AACTCGATTT CGCGAAGGAA GTGTGCGACG CGGTGTTCGA CGTGTGGCAG
CCGACGCCCG AGCGCAAGTC GATCGTGAAC CTGCCGGCCA CGGTGGAAAT CGGCACGCCG
AATTACTACG CGGACCAGAT CGAATGGATG CACCGCAACC TCGCGCGCCG CGATTCGCTG
ATCCTGTCGG TGCACCCGCA CAACGACCGC GGCACCGCGG TCGCGGCGGC CGAACTCGCG
GTGATGGCTG GCGCCGACCG GATCGAGGGC TGCTTGTTCG GCAACGGCGA ACGCACGGGT
AACGTCGATC TCGTGACGCT CGCGCTGAAC CTGTACACGC AGGGCGTCGA TCCGGGCCTC
GATTTCTCGC AGATCAACGA AGTGGCGCGC ACGTCCGAGG AATGCACGCA GTTGCCGGTC
CACCCGCGTC ATCCGTATGT CGGCGACCTC GTGTTCACCG CGTTCTCCGG CTCGCACCAG
GACGCGATCA AGAAGGGCTT CGCGGTACAG CGCGCCGACA CGGTATGGGA AGTGCCGTAC
CTGCCGATCG ATCCAAACGA TCTCGGCCGC ACGTACGATT CGATCATTCG CGTGAACAGC
CAGTCGGGCA AGGGCGGGAT CGCATACCTG CTCGAACAGG GCTACGGCGT CGCGCTGCCG
CGCCGCATGC AGGTCGATTT CAGCGCGGCC GTACAGCGCC TGACCGACGA GAGCGGGCAC
GAGGTGACGA GCGCGCAGAT CTGGGCGCTG TTCCAGCAGG AATACGTCGA AAGCGACACG
CCGCTGCGTT ATGTCAGCCA TGAGCTGACC GAGCGCGACG GCCGCGAGAC GATCGTGCTG
ACCGCTGACG TGCACGGCGA GCGCCGCGTG CTGCGTGGCG AAGGCAACGG CCCGCTCGAC
GCGCTGATGC ATGCATTGCA CACGCCGCTG CGGATCCAGC ATTACGAGGA ACGCGCGCTG
TCGCAGGGAG CCGATGCGAA GGCGATCGCG ATCGCCGAGC TGGCCGGTAC GGGCGTGCGC
GGCAGCGCGT TCGGTGTCGG CGTCGATGCG AACCTGACGA CGGCGTCGAT TCGTGCGGTG
ATCAGCGGCG TGAATCGCGC GTATACGCGT GCGGATGAAG TTGCGCGAGC AACCTTATTC
GACGCGGAGC GCGCGGTGAC GGCCGTGGCG TAA
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| Protein sequence | MMLKNPATKY RPFTPVNLPD RTWPSRTITQ APIWMSTDLR DGNQALFEPM DATRKMRMFK
TLVAIGFKQI EVAFPSASET DFNFVRELIE GGHIPDDVTI EVLTQARDDL IERTFASLRG
AKRAIVHLYN ATAPEFRKIV FNLDRDGVKQ LAVNAARTIK RCADAATDTQ FTLQYSPETF
TATELDFAKE VCDAVFDVWQ PTPERKSIVN LPATVEIGTP NYYADQIEWM HRNLARRDSL
ILSVHPHNDR GTAVAAAELA VMAGADRIEG CLFGNGERTG NVDLVTLALN LYTQGVDPGL
DFSQINEVAR TSEECTQLPV HPRHPYVGDL VFTAFSGSHQ DAIKKGFAVQ RADTVWEVPY
LPIDPNDLGR TYDSIIRVNS QSGKGGIAYL LEQGYGVALP RRMQVDFSAA VQRLTDESGH
EVTSAQIWAL FQQEYVESDT PLRYVSHELT ERDGRETIVL TADVHGERRV LRGEGNGPLD
ALMHALHTPL RIQHYEERAL SQGADAKAIA IAELAGTGVR GSAFGVGVDA NLTTASIRAV
ISGVNRAYTR ADEVARATLF DAERAVTAVA
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