Gene Bcenmc03_4242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_4242 
Symbol 
ID6127073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp1196150 
End bp1196656 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content76% 
IMG OID641651348 
Productprotein tyrosine phosphatase 
Protein accessionYP_001777881 
Protein GI170736621 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.135895 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGC GCCCGTCCCT GCTCGTCGTG TGCGAAGGCA ATCTGTGCCG CAGCCCGATC 
GCCGCCGCGC TGCTGGCGGC ACGGCTGCCG CACGCGACGG TCCGCTCCGC CGGCCTCGCG
CCGCGCACCG GCCATCCGGC CGATCCGCTC GCCCGCGCCG TCGCGCACGA GCGCGGGCTC
GATCTCGACG CGCACGTGGC CGGCCCCGTC ACGGCCGACC TGTGCCGGCA CGCGGACCTG
ATCCTCGTGA TGGACCGCGC GCAGCAGCGC GACGTCGAAG CGCGCCACCT GTTCACGCGC
GGCCGCGTGT TTCGCCTCGG CGAGCACGCG ATCGCACCCG GCGGCACGCG TGCCGGCTTC
GACGTTCCCG ACCCCTATCG CGGCACGCGC GCCGACTTCG TGCGCTGCGC ATCGCTGATC
GCCGCCGCCG TCGACGGCTG GCGCCCGCTC ATCCTCGCGC GCTGGCCCGA CCGGCCGGCC
GCCCTTTCCC CGTCGACCTC ATCATGA
 
Protein sequence
MSARPSLLVV CEGNLCRSPI AAALLAARLP HATVRSAGLA PRTGHPADPL ARAVAHERGL 
DLDAHVAGPV TADLCRHADL ILVMDRAQQR DVEARHLFTR GRVFRLGEHA IAPGGTRAGF
DVPDPYRGTR ADFVRCASLI AAAVDGWRPL ILARWPDRPA ALSPSTSS