Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_4234 |
Symbol | |
ID | 6127065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 1185640 |
End bp | 1186476 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641651340 |
Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
Protein accession | YP_001777873 |
Protein GI | 170736613 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.201628 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.3753 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGACTC GTATTCAAGC CATTCCCGCC GTGATCGCAC TCGTCTGCGC TACCGGCATG ACGAGCGTCG TCGCGGCCGA AGCCGGCACG GCCACGCTGC CGAAAGGCGT CGTCGCCGTG GTGAACAACA TGCCGATCGC GCAGAGCGAC GTGGACGCGA TCGTCAGCGC ATCCGGGCAA GCCGATACGC CGGCGCTGCG CGACGCGGTG AAGCGCGACC TGATCGTGCG GCAACTGGTC GAGCAGGCCG CCGACAAGGC GAACTACGGC AGCCGCCCCG AAGTGCAGGG TATCGTCTCG CGTGCGCGTG CGAACGCGGC GGCCGATCTG TACCTGCGCG ACGCGCTGGG CGCGCAGCGT GTGACCGATG CGCAAGTGAA GGCGCATTAC GACTACATCG TCGCGAACGC GGCGCAGTTC GAATACCGGG CGGAAGTGGT GGCCGTGGCC GATCCAGCGA AGGCGAATGC GGCGGCCGCC GAGCTGAAGC AGGGCGCGGC CTTCGACACG GTCGCGAAGA AGTACAACAC GACCGCCAAC GGCGGCGTGG CCGAGTGGAG CGAGCTGAAG ACGCCGCTGG CCGAAGGCCG TACGGGCGGG CTGCCGATGC CGCTCGCGCA GGCGATGACG TCGCTGAAGC CGGGCGCCGT CTCCGGCCCG ATCCGGATCG GCAATGCGTA TGCGTTCGTG AAGCTCGACG ACAAGCGCCC GGTGGTCGTG CCGAGCTTCG ACAAGGCCAA GGGCGTGCTG CGACAGCAAC TGGAGCAGCA GGCCCGGCAA AGCGCGATGA CCGCACTGGT CGACAAGCTG GCCGCGCAGG CGACGATTCA GCAGTAA
|
Protein sequence | MKTRIQAIPA VIALVCATGM TSVVAAEAGT ATLPKGVVAV VNNMPIAQSD VDAIVSASGQ ADTPALRDAV KRDLIVRQLV EQAADKANYG SRPEVQGIVS RARANAAADL YLRDALGAQR VTDAQVKAHY DYIVANAAQF EYRAEVVAVA DPAKANAAAA ELKQGAAFDT VAKKYNTTAN GGVAEWSELK TPLAEGRTGG LPMPLAQAMT SLKPGAVSGP IRIGNAYAFV KLDDKRPVVV PSFDKAKGVL RQQLEQQARQ SAMTALVDKL AAQATIQQ
|
| |