| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4224 |
|---|
| Symbol | |
|---|
| ID | 6127055 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | + |
|---|
| Start bp | 1164716 |
|---|
| End bp | 1165411 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641651330 |
|---|
| Product | two component LuxR family transcriptional regulator |
|---|
| Protein accession | YP_001777863 |
|---|
| Protein GI | 170736603 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.322534 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.434129 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGGAA ACTTCCCCAT CCGCATCGTG ATCGCCGACG ACCATCCGGC GGTGGTCATC
GGCGCGCGCT ACGAACTGTC CGCGACGAAT ACGCTCGCGG TGGTCGCGAG CGCCAACAAT
TCGACCGAAC TGATGGAAAC CCTCGCGAAC CATCCGTGCG ACGTGCTCGT GTCCGACTAC
GCGATGCCAG GCACCGAATA CGGCGACGGC CTCGCGATGT TCTCCGCGAT CCTGAAGCGT
TACCCGAATC TGCGCATCGT CGTGATGACG ATGATGGAGA ACGCGGTGGC GCTGCGCGCG
CTGCTCGACC TCGGCATCGC ATGCGTAGTC AGCAAATCCG ACATGACGAG CCATCTGACG
ATGGCGATCC ACGCGGCCTA CACGAACGGT CGCTACCTGT CGCCGTCGAT GGACCGCATC
CTGCGGGCCG CCGGCAATTC GGGCGGCAAG GCGCCGGCGC TGTCCGCGCG CGAGCTTGAA
GTGATTCGCC TCTTCGCGTC GGGCCTGTCG GTCAACGACA TCGCCGAGCA ACTGAGCCGC
AGCAAGAAAA CGATCAGCAC GCAGAAGAGT TCGGCGATGC AGAAACTGGG CATCGAGCGC
GACGTCGATC TCGTCCGCTA TGCGATCGCG TGCGGGCTCG TGTCCGACTA CGGTTATGCG
ACGGCGCTGC CGGCCGTCGA CGAACCCCCG CGCTGA
|
|---|
| Protein sequence | MPGNFPIRIV IADDHPAVVI GARYELSATN TLAVVASANN STELMETLAN HPCDVLVSDY
AMPGTEYGDG LAMFSAILKR YPNLRIVVMT MMENAVALRA LLDLGIACVV SKSDMTSHLT
MAIHAAYTNG RYLSPSMDRI LRAAGNSGGK APALSARELE VIRLFASGLS VNDIAEQLSR
SKKTISTQKS SAMQKLGIER DVDLVRYAIA CGLVSDYGYA TALPAVDEPP R
|
|---|
| |