Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_4223 |
Symbol | |
ID | 6127054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 1159654 |
End bp | 1164495 |
Gene Length | 4842 bp |
Protein Length | 1613 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641651329 |
Product | YadA domain-containing protein |
Protein accession | YP_001777862 |
Protein GI | 170736602 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.551449 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAGA CGTATCGCAA CATCTGGAAC GCGGCGACGG GCACATGGAC GGCCGTGGCC GAAACGGCGC GCTCGCGCTC GAAGGGGTCG GCGCGCGCGG CGCGCCAGGC CGTGGCGGTG CTCGCGCTGG GCAGCGCATC GATCGGCGGC GCGTTCGCGG CCGATGCATG CACGACCGAG GACGGCGCAA GCGGGTCGGT CGACGCGGCC GGCGTGTGCA AAGTAGCGAG CAAGATCGGC ACGAGTGCGA TTGGCACAAC GGCCGCACTC GACGACACGT ACGTGAAAGT TCGGTCCGGG ACTTACGCGC TCCCCAACGC CGCCCTGGCG GCCGATAGCG CGACCGCTAT CGGCGCGAAT GCCAGCGCCG CAGGACAGTC GTCCGTCGCG ATCGGCGGCA ATACCATGGC AACCGTGAAC GGCGTGGCGA TTGGCACACT TTCGCAAGCA ACCGGAGCGA ATTCGACGGC AGTCGGCGTA GGCGCCGCGG CTACCGCGTC CGCGGCTTCG GCACTGGGAC GCGGCGCGGC AGCTAGCGGA ACAAACACGT CGGCATTTGG CAACGGCGCT CGGGCTAGCG GCGATAGCGC ATCGGCATTG GGCCGTGGCG CCGTGGCAAG CGAAGCCAAT TCGGTTGCGC TTGGTGCCAA TTCCACCGCT GATCGCGCGA ATGCCGTCTC GGTTGGCACT ACGAGCGCTC AGCGGCAGAT CATCAATGTC GCCGACGGTA CGGCCGGTAC GGATGCGGTC AACCTGAATC AGTTGAACGC CGCGATCGCG GCGAGCGATC AGTATTTCAT GGTCAACAGC ACGAGCGCGA ATCTCGCGAA TGCGACGGGC GCCAATGCTG TTGCGATCGG GCAAGCCGTG ACGTCCAGCG GCTCCAGCTC GGTTGCGATC GGTTCGGGTA CCTCAGCAGA CGGGCTTCAT TCGATGGCAC TCGGTGCGTC GTCGCGCGTC GTGGGCGACA GCAACCTGGC AGTGGGCGAT GGTGCAACGG TAACGAGTTT GACCACTGCG CCGACGAACG CCATTGCAAT CGGCAAGGGC GCCAACGTAT CCGACGCCGG GGTAGCCGGA GCGACCGGCT CGATCGCAAT CGGCACTAAC GCGGCTGCCG GCGGCACGGG CACGATCATG ATCGGGACGA GCACGCGCCA TGCGGGCTCC GGCGCCACGG TCCTGGGCAC CAATGCGAGC GCGATGGGCG GTGGCGCGGG TGTTGCGATG GGGATCAACA GCGCCGCCGC GGGCAATGCT TCGGTTGCGA TGGGCCCGAA CGCCACAGCC GCTGGCGCTG GCTCGATCGT AATCGGCAAT CAGGCTGCAA CCACGGCCGC TAACAGCGTG GCACTCGGCA ATGCAGCCAC AGGCAGCGCC GTCAACACCA CCGCGATCGG CAGCAATGCC AAGGCAACCG GGAACAACTC GACCGTGCTC GGCCAAAGCT CGTCCGCGAG CGGCCTGTCG GCGGTCGGCA TCGGCTTCCG GGCCAATGCA TCCGGGCAGG AGGCCATTTC GCTCGGTTCG GACTCAGTAG CGACCGGACC GCAAAGCACC GCCATTGGTA CGTCGGCAAC CGCAAACAGC ACGGGTTCGG TTGCGCTCGG CAACGGAGCC ACGAGCAGCG GCGCCAATGC CACCGCAATC GGCCGTCTTG CTACTGCCGG CGCCGCCAAC GCCACGGTAT TGGGCGGAAG CGCGACTGCA ACGGGTCAAA GCGCAATCGC GATCGGCCAA AGCGCGCATG CAAACGGTCT GTCGGCAATC GGCATCGGCT TCCTCAGCGA CGCGCAAGCC GACAACTCGG TCGCACTCGG CGCCCGCTCC GTCGCGAATC GCGACAACAC CGTTTCCGTC GGTTCGGCCA GCCAGCAGCG TCAGATCGTC AACGTCGCAG CCGGCACGCA AGGTTCCGAC GCGGTGAACG TCAGCCAGCT CGCGCCGGTC GTGACCGCTC TCGGCGGCGG CGCAACCATC GATTCGGCGA CGGGCGCCGT GACCGGCCCC ACGTACACGC TCACCAACGG CGGCGCACAA ACGACGGTCG GTGGCGCACT CGGCGCACTC GACAGCGCGC TCACGACTGC CAACGGCAAC ATCGCACGCA ACACGGGCGA CATCACGACG ATCAACACCA AGCTCGACGG CCTGTCGAAC GGCACGGTTG GCCTCGTCCA GCAATCGGCT GCCGGTGCTG ACATCACCGT CGGCGCGAAC ACCGATGGCG CAGCCGTCGA CTTCACCGGC ACGACCGGCG CACGCAAGCT GACCGGCGTC GACGCAGGTG CGGTCTCGGC GTCGAGCAGG GATGCGGTGA ACGGCTCGCA GCTGCACGGC GTGTCGAGCA GCGTCGCATC GGCCATCGGC GGCGGTTCCG TCGTCAATGC CGACGGTTCG ATCTCCGCAC CGAGCTTCAC GGTCGGCGAC GGCAGCGGCG GCACCACCAC GGTTCGCTCG GTCGGCGGCG CAGTCGCCAA CCTCGACGGT CGTGTGACGA CGAACGAAGG CGACATCGCA TCGCTGGCCG ACCAGATCGG CAGCGGCACG CTCGGCCTCG TCCAGCAATC GGCTGCGGGC GCTGACATCA CCGTCGGCGC GAACACCGAC GGCGCAGCCG TCGACTTCAC CGGCACGGCC GGCGCACGCA AGCTGACCGG CGTCGATGCT GGCACGGTTT CGGCATCGAG CAAGGATGCG GTGAACGGCT CGCAACTGCA CGGCGTGTCG AGCAGCGTCG CATCGGCCAT CGGCGGTGGT TCCGTCGTCA ACACCGACGG TTCGATCTCG GCACCGAGCT TCACGGTCGG TGACGGCAGC GGCGGCACCA CCACGGTTCG CTCGGTCGGC GCCGCGGTCG CCAACCTCGA CGGTCGTGTG ACGACGAACG AAGGCGACAT CGCATCGCTG GCCGACCAGA TCGGCAGCGG CACGGTCGGG CTCGTCCAGC AATCGGCTGC CGGCGCAGAC ATCACGGTCG GCGCGAATAC CGACGGCGCA GCCGTCGACT TCACCGGCAC GGCCGGCGCA CGCAAGCTGA CCGGCGTCGA TGCAGGCGCG GTCTCGGCGA CGAGCACCGA CGCGGTGAAC GGCTCGCAAC TGCACGGCGT GTCGAGCAGC GTCGCATCGG CCATCGGCGG TGGCTCGATC GTCAACGCCG ACGGCTCGAT CTCCGCACCG AGCTTCACGG TCGGTGACGG CAGCGGCGGC ACCACCACGG TTCGCTCGGT CGGCGGCGCA GTCGCCAACC TCGACGGTCG TGTGACGACG AACGAAGGCG AGATCGCATC GCTGGCCGAC CAGATCGGCA GCGGCACGGT CGGCCTGGTT CAGCAATCGG CTGCGGGCGC TGACATCACC GTCGGCGCGA ACACCGACGG CGCAGCGGTG AACTTCACCG GCACGACCGG CGCTCGCAAG CTGACCGGCG TCGACGCAGG CGCGGTTTCC GCATCGAGCA CCGACGCGGT GAACGGCTCG CAACTGCACG GCGTGGCGGA CAGCGTGGCA TCGGCCATCG GCGGCGGCTC GGTCGTGAAC GCCGACGGTT CGATCTCGGC GCCGAGCTTC ACGGTCGGCG ACGGCAGCGG CGGTTCGACC ACGGTCCATT CGATCGGCGA CGTCGTGACC AACATCGACG GTCGCGTGAC GACGAACGAA GGCGCGGTGG CGTCGCTGGC CGATCAGATC GGCAGCGGCA CGCTCGGCCT GGTTCAGCAA GCTGCCCCGG GCGCCAACCT GACGGTCGGC GCGAACACCG ACGGCGCTGC GGTGAGCTTC GTCGGCACGG CTGGCGCACG CAAGCTGTCG GGCGTCGCGA ACGGCGTGAA CGACGACGAT GCAGTGACGA TCGCCCAGTT GAAGGCGACG GGCCTCATCG ACTACACGGG CAAGGAAATC GCGGCCGTGA CGTATGACGA CATCTCGCTT GCCAGCGTGA CCTTCGGCGG TTCGGATGGC ACCAAGCTGC TCAACGTCGG GCCGGGCCTG ATCGCGGCGG GCAGCATGGA AGCCGTGAAT GGTGGTCAGT TGCACGACCT CCAGGATCAG TTCGCGCGGA AATACGCCGA ACTCGACGGC CGGGTCGGCG AACTCGAAAC CGGTGGCGGT TCGGGTGGCG GCGGTGGTGG TGACGGTGGC GGCAGCGTCG GCCCCGGCAC CGGCGGCGAT GGCTCGCTCG TCGTCGGCGA CGGCTCCGCA GCCTCGGGCG AGAACAGCTC GGCGATCGGC CAGGGTTCGG CCGCATCGGG TGACGGCAGC ACGGCGGTCG GCCAGGGTTC GAACGCATCG GGCGGCAACA GCTCGGCGAT CGGCCAGGGT TCGAACGCAT CGGGCAGCAA CAGCTCGGCG ATCGGCCAGG GCGCGGTGGC CTCGGGCGAC AGCAGCACCG CAATCGGCCA GGGTTCGAGC GCGACCGGCA GCGGTTCGGT GGCGATCGGC GCGGGCTCGG TGGCAACCGA GGCGAACACC GTGTCGTTCG GTGACGGCAC CGCCGAAGGC AATCGCCGGC TCGTGAACAT CGCGGACGGC GTCAACGCCA GCGACGCGGC GACGAAGGGC CAGCTCGATC GTGCGATCAA CGGCATGCAA GGCCAGATCA ACGACGTCGC GAAGAACGCG TACGCCGGTG TCGCGGCAGC GATGGCGATG CCGAACCTGA CGCCGTCGCA GCCGGGCAAG ACCGTCGTCG CAGCCGGCGC CGCGAACTAC AAGAGCGGCT CGGCGATCGC AGCCGGCGCG ACCTACCGGA CGCGCGACGG CAAGTGGCTG ATGAACGGCG CCGTGTCCGT CACGTCGACG GGCGATGCAG GTGTGCGTGC ACAGGTCGGC TACGAGTTCT GA
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Protein sequence | MNKTYRNIWN AATGTWTAVA ETARSRSKGS ARAARQAVAV LALGSASIGG AFAADACTTE DGASGSVDAA GVCKVASKIG TSAIGTTAAL DDTYVKVRSG TYALPNAALA ADSATAIGAN ASAAGQSSVA IGGNTMATVN GVAIGTLSQA TGANSTAVGV GAAATASAAS ALGRGAAASG TNTSAFGNGA RASGDSASAL GRGAVASEAN SVALGANSTA DRANAVSVGT TSAQRQIINV ADGTAGTDAV NLNQLNAAIA ASDQYFMVNS TSANLANATG ANAVAIGQAV TSSGSSSVAI GSGTSADGLH SMALGASSRV VGDSNLAVGD GATVTSLTTA PTNAIAIGKG ANVSDAGVAG ATGSIAIGTN AAAGGTGTIM IGTSTRHAGS GATVLGTNAS AMGGGAGVAM GINSAAAGNA SVAMGPNATA AGAGSIVIGN QAATTAANSV ALGNAATGSA VNTTAIGSNA KATGNNSTVL GQSSSASGLS AVGIGFRANA SGQEAISLGS DSVATGPQST AIGTSATANS TGSVALGNGA TSSGANATAI GRLATAGAAN ATVLGGSATA TGQSAIAIGQ SAHANGLSAI GIGFLSDAQA DNSVALGARS VANRDNTVSV GSASQQRQIV NVAAGTQGSD AVNVSQLAPV VTALGGGATI DSATGAVTGP TYTLTNGGAQ TTVGGALGAL DSALTTANGN IARNTGDITT INTKLDGLSN GTVGLVQQSA AGADITVGAN TDGAAVDFTG TTGARKLTGV DAGAVSASSR DAVNGSQLHG VSSSVASAIG GGSVVNADGS ISAPSFTVGD GSGGTTTVRS VGGAVANLDG RVTTNEGDIA SLADQIGSGT LGLVQQSAAG ADITVGANTD GAAVDFTGTA GARKLTGVDA GTVSASSKDA VNGSQLHGVS SSVASAIGGG SVVNTDGSIS APSFTVGDGS GGTTTVRSVG AAVANLDGRV TTNEGDIASL ADQIGSGTVG LVQQSAAGAD ITVGANTDGA AVDFTGTAGA RKLTGVDAGA VSATSTDAVN GSQLHGVSSS VASAIGGGSI VNADGSISAP SFTVGDGSGG TTTVRSVGGA VANLDGRVTT NEGEIASLAD QIGSGTVGLV QQSAAGADIT VGANTDGAAV NFTGTTGARK LTGVDAGAVS ASSTDAVNGS QLHGVADSVA SAIGGGSVVN ADGSISAPSF TVGDGSGGST TVHSIGDVVT NIDGRVTTNE GAVASLADQI GSGTLGLVQQ AAPGANLTVG ANTDGAAVSF VGTAGARKLS GVANGVNDDD AVTIAQLKAT GLIDYTGKEI AAVTYDDISL ASVTFGGSDG TKLLNVGPGL IAAGSMEAVN GGQLHDLQDQ FARKYAELDG RVGELETGGG SGGGGGGDGG GSVGPGTGGD GSLVVGDGSA ASGENSSAIG QGSAASGDGS TAVGQGSNAS GGNSSAIGQG SNASGSNSSA IGQGAVASGD SSTAIGQGSS ATGSGSVAIG AGSVATEANT VSFGDGTAEG NRRLVNIADG VNASDAATKG QLDRAINGMQ GQINDVAKNA YAGVAAAMAM PNLTPSQPGK TVVAAGAANY KSGSAIAAGA TYRTRDGKWL MNGAVSVTST GDAGVRAQVG YEF
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