Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_4203 |
Symbol | |
ID | 6127036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 1138451 |
End bp | 1139098 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641651311 |
Product | lytic transglycosylase catalytic |
Protein accession | YP_001777844 |
Protein GI | 170736584 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCACGC AAGACTTCGT GGCGATGGCT CAGCAGTGTG CGCCTGCTGT CGCCCCACAG ACGTTGGCTG CCATTGTACG AATCGAATCG GGATTCAATC CCTACGCTAT CGGTGTTGTC CATGGCCGTT TGGTGAGACA GCCTCGGCGC GAGGACGAAG CGATCGCCAC GGTCAAGGCA TTGCAAGCGG CAGGGTGGAA CTACAGCGCC GGCCTCGCGC AAATCAATCG CGAAAACTGG TCTCGTTACG GATTGACCGT GGGGACCGTC TTCGACGTCT GTCGGAACCT GAGCGCTGGT GCGGCGATTC TTCGGGCATG TTTTCTGCGG GCTCGCGTCA TTCATGTCCA TCCACAAGAG GCGTTGCGCG CTGCGCTGTC GTGCTATGTG AGCGGGAATT TCGTAACCGG ATTTCGCGTC GGATATGTGC GACGGATTAC GGAAGCAGCG GCGTCGGGCG ACACTTTCGT CCCTGCGCTG ACGTCAGTTG CAAAGCCGAT TCCGGTGATA CCCGACCGTG TGACTGGGTC TCGGGCTGAG AGCCGCGGGC GCTCGACTCC TGTGTCTCCT CCACCCTCGA ACCCGAACGA CGATACAGCG CGAAGCCAAA ATAACGGTGG AGTCGCAGGC AGTGCCGTGA TCTTCTGA
|
Protein sequence | MTTQDFVAMA QQCAPAVAPQ TLAAIVRIES GFNPYAIGVV HGRLVRQPRR EDEAIATVKA LQAAGWNYSA GLAQINRENW SRYGLTVGTV FDVCRNLSAG AAILRACFLR ARVIHVHPQE ALRAALSCYV SGNFVTGFRV GYVRRITEAA ASGDTFVPAL TSVAKPIPVI PDRVTGSRAE SRGRSTPVSP PPSNPNDDTA RSQNNGGVAG SAVIF
|
| |