Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_4196 |
Symbol | |
ID | 6127029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 1131670 |
End bp | 1132494 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641651304 |
Product | conjugal transfer protein TrbG/VirB9/CagX |
Protein accession | YP_001777837 |
Protein GI | 170736577 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
TIGRFAM ID | [TIGR02781] P-type conjugative transfer protein VirB9 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.258229 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.907108 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATACGC TCGCGACCAT GGCGATCCTA TTAGCGTGCT TTGCGGCGCA AGCGGTCGAT GCCCACATCA CGCCGGACTG GACGCGCGAT GCCAGGGTGC GCAAAGTGCG TTATGTGCCT GACGAAGTCG TGCGCATTTT CGCGCAGCGC GGCTTTGCCA CCCACGTCGA GCTGGATCCG ACCGAGCACA TTCTCGTGGT TGCGCCAGGG GACCGCGATG GCTGGTATGT GGTAGCCAAT CGGGGAGACC ATGACGTCTA TCTGAAGCCG AAACTCGCCG CTCATGACAC GAATCTCATT GTCCGGACCG ATCGGCGCAG CTACAGCTTT GACCTTCTCG TTTTGCCCCT GAAAGAACGC TTTGGCAACG CGCACGAGAT GTACCGGGTA AGTTTCGTGT ACCCGGACAC TGCTGCGTCG GATGTATCTA TTGCCGCGCG CTTGGCGTGT TTGCAGAAAC GGCTGTCTCA GCCGTCTGTC GTGCGTAACG CCGCGTACTC GATGCAGGTC ATGCCACATG CCGAGGATAT CGCACCGTCC GCAGTATGGG ACGACGGTCG CTTTACGTAC ATTCGAATCC CCAACAATCG CCGTATACCC GCGATCTTCC AAGTTGAGGA CGATGACACC GAACGCGTGG TGGACAAGCA CATGGACCGT GATGTGGTGG TCGTCCATGA GCTTGCCCGC CGACTCGTGT TGCGTCTGGG CGATGAGGCG GTTGGTTTGT GGAACGACGC ATTCGACATT GATGGTGTCG CGCCGCAGCA CGGTGTGACG GTCGACGGCG TGCGCCGCAC GCTGCGGAGT CGCGAACATG ACTGA
|
Protein sequence | MNTLATMAIL LACFAAQAVD AHITPDWTRD ARVRKVRYVP DEVVRIFAQR GFATHVELDP TEHILVVAPG DRDGWYVVAN RGDHDVYLKP KLAAHDTNLI VRTDRRSYSF DLLVLPLKER FGNAHEMYRV SFVYPDTAAS DVSIAARLAC LQKRLSQPSV VRNAAYSMQV MPHAEDIAPS AVWDDGRFTY IRIPNNRRIP AIFQVEDDDT ERVVDKHMDR DVVVVHELAR RLVLRLGDEA VGLWNDAFDI DGVAPQHGVT VDGVRRTLRS REHD
|
| |