Gene Bcenmc03_4196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_4196 
Symbol 
ID6127029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp1131670 
End bp1132494 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content60% 
IMG OID641651304 
Productconjugal transfer protein TrbG/VirB9/CagX 
Protein accessionYP_001777837 
Protein GI170736577 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3504] Type IV secretory pathway, VirB9 components 
TIGRFAM ID[TIGR02781] P-type conjugative transfer protein VirB9 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.258229 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.907108 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACGC TCGCGACCAT GGCGATCCTA TTAGCGTGCT TTGCGGCGCA AGCGGTCGAT 
GCCCACATCA CGCCGGACTG GACGCGCGAT GCCAGGGTGC GCAAAGTGCG TTATGTGCCT
GACGAAGTCG TGCGCATTTT CGCGCAGCGC GGCTTTGCCA CCCACGTCGA GCTGGATCCG
ACCGAGCACA TTCTCGTGGT TGCGCCAGGG GACCGCGATG GCTGGTATGT GGTAGCCAAT
CGGGGAGACC ATGACGTCTA TCTGAAGCCG AAACTCGCCG CTCATGACAC GAATCTCATT
GTCCGGACCG ATCGGCGCAG CTACAGCTTT GACCTTCTCG TTTTGCCCCT GAAAGAACGC
TTTGGCAACG CGCACGAGAT GTACCGGGTA AGTTTCGTGT ACCCGGACAC TGCTGCGTCG
GATGTATCTA TTGCCGCGCG CTTGGCGTGT TTGCAGAAAC GGCTGTCTCA GCCGTCTGTC
GTGCGTAACG CCGCGTACTC GATGCAGGTC ATGCCACATG CCGAGGATAT CGCACCGTCC
GCAGTATGGG ACGACGGTCG CTTTACGTAC ATTCGAATCC CCAACAATCG CCGTATACCC
GCGATCTTCC AAGTTGAGGA CGATGACACC GAACGCGTGG TGGACAAGCA CATGGACCGT
GATGTGGTGG TCGTCCATGA GCTTGCCCGC CGACTCGTGT TGCGTCTGGG CGATGAGGCG
GTTGGTTTGT GGAACGACGC ATTCGACATT GATGGTGTCG CGCCGCAGCA CGGTGTGACG
GTCGACGGCG TGCGCCGCAC GCTGCGGAGT CGCGAACATG ACTGA
 
Protein sequence
MNTLATMAIL LACFAAQAVD AHITPDWTRD ARVRKVRYVP DEVVRIFAQR GFATHVELDP 
TEHILVVAPG DRDGWYVVAN RGDHDVYLKP KLAAHDTNLI VRTDRRSYSF DLLVLPLKER
FGNAHEMYRV SFVYPDTAAS DVSIAARLAC LQKRLSQPSV VRNAAYSMQV MPHAEDIAPS
AVWDDGRFTY IRIPNNRRIP AIFQVEDDDT ERVVDKHMDR DVVVVHELAR RLVLRLGDEA
VGLWNDAFDI DGVAPQHGVT VDGVRRTLRS REHD