| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4195 |
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| Symbol | |
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| ID | 6127028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 1130454 |
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| End bp | 1131677 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641651303 |
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| Product | conjugation TrbI family protein |
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| Protein accession | YP_001777836 |
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| Protein GI | 170736576 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.583756 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAGG ACACTTCGCC CAACGGCGCA GCGACGGACG ACGAGATTCG TCGCAACAGC
CCGGCAGATA TGAACACGGG TATGGGGTCC GAATCGTCTG TCATGCTCGA TCGCGGCATG
CCCAGCCTGG ATGGGTTCGG GCGACGATCG TTCATCAACT GGCTAGTACC GCTCACGATC
ATCGTACTTG CGCTAATAGG CGCGGTCTGG ACAGTTCATG GTGTGCTCGC TCACCGAGAC
GAGGCTGCGC GTGCGCGCCG CAGTGCGCTC CATGCGCGAG GCGCACACGA AAAGGTGTTC
GACGAGGTGC CGGCACTTGC CGAGTCTGCG TCGGCCGCTG CAATGCCCAC ACCGACGCCA
GCACCGGCCG CGGTACAGCC TGTGCCGTCC AGTGATCGTG CTGCTCCGTT ACGCAGCTAC
TACGACGCGC CGTTGCTCGC CGTGGGGGCG AGCAACGGGC AAATGGCAGA CGCGAGCGAG
AGTGAGTCAG CTTCCCCCAG TATTTTGCCC GCGCACGCGG ACCAGCAGCA GTCGAATGCG
ACTGCCGGTA TGGCCGAGGA GCGGGCGAAA CCCTTCTCAC AGCCGCTGTC TCAGGCGCTC
ACGCCGACGC GCGTGCCCAC GGTGATAGCG GCGTTTATCG GCAACCGCAG TTTGCTACTC
GCTCAGGGCA CGAAGATCGA TTGCGCGGGC GACACCGCGT TCGATTCCAC CCAGGCAGGT
ATATCGACTT GCACGGTCGC CCGTAATGTC TATTCCGACG ACGGGCGCGT GGTGCTGATC
GAGCGAGGCT CGCAAATTAA TTGCGAATAT CGCGCGAATC TTTCACCTGG ACAACGACGT
GTATTTGTTC TGTCAGCACG AATTGCTACA CCGCACGGTG TCACTGTACA GATCGATTCG
CCGGTAGCCG ACGCGCTGGG CCGCATGGGT ATGGATGGAT CGATCGAGAA TCACTGGGGC
GCGCGCGTGG GCGCGGCCAT GATGCTCGGA CTAAGTCACG ATGCGATCGG TTATCTGGCC
ACGCGCGGGG GCAATGGCAA CGGCACGATT GTCTACCAGA ACACGCAGGC GCAAGGCAAC
GACATGGCCA CACGCGTACT CGATCAGACC ATCAATATTG CGCCGACGCT CAGGCAACAT
CAGGGTACCG AGTTCACGAT TGTTCTGGCT CGCGATCTGG ATTTCAGTTC GGTCTATACG
CTGGAGCCGG AGGGAGTGCG ATGA
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| Protein sequence | MTEDTSPNGA ATDDEIRRNS PADMNTGMGS ESSVMLDRGM PSLDGFGRRS FINWLVPLTI
IVLALIGAVW TVHGVLAHRD EAARARRSAL HARGAHEKVF DEVPALAESA SAAAMPTPTP
APAAVQPVPS SDRAAPLRSY YDAPLLAVGA SNGQMADASE SESASPSILP AHADQQQSNA
TAGMAEERAK PFSQPLSQAL TPTRVPTVIA AFIGNRSLLL AQGTKIDCAG DTAFDSTQAG
ISTCTVARNV YSDDGRVVLI ERGSQINCEY RANLSPGQRR VFVLSARIAT PHGVTVQIDS
PVADALGRMG MDGSIENHWG ARVGAAMMLG LSHDAIGYLA TRGGNGNGTI VYQNTQAQGN
DMATRVLDQT INIAPTLRQH QGTEFTIVLA RDLDFSSVYT LEPEGVR
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