| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4172 |
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| Symbol | |
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| ID | 6127005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 1109230 |
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| End bp | 1110582 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641651280 |
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| Product | pyridoxal-dependent decarboxylase |
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| Protein accession | YP_001777813 |
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| Protein GI | 170736553 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGAAC TTTCCTTGCT GGCCGACGCC GACCGGCGCG CGCACGCGTA TCTGGCTGCA
ACGAACGAGC GGCGCGCGTT TCCCGACGCG GCCGCACTCG CCGGCCTCGC TGCGTTCGAC
GAGCCGCTGC CCGATGCAGG CCGCCCAGCC GACGACGTGC TGCGCCTGCT CGACGAGCAC
GGCGCGCCCG CGACGGTCGC ATCGAACGGC CCGAACTACT TCGGCTTCGT GATCGGCGCG
ACGCTGCCGG CTGCGGCGGC TGCCGAGCGG CTGATGCTCG CGTGGGACCA GTGCGCGTCG
TCGTATGCGA ATTCGCCGGT GGCCGCGACG CTCGAGCGCC AGGCCGCGCG CTGGGTCGTC
GATGCGCTCG GGTTGCCCGA AGGCAGTGCG GTCGGCTTCG GCACGAGCGC GACGGCCTGC
ACGCTCGTCG CACTGGTGGC CGCGCGGCGC GCGCTGCTCG CGCGCAAGGG CTGGGATATC
GACGAGGACG GGTTGATCGG CGCGCCGGAA GTGAAAGTCG TGATCTCCGC GCTCGCGCAC
ATCACGGTGA AGAAGGCGCT GCGCGTGCTC GGCTTCGGGA TGAAGCGCAT CGTCGTCGCG
CCGGTCGATA CGCACGGCCG GATCGACCCG GCGCAGTTGC CGCCGCTCGA CGACATGACC
ATTTTCTGCG TGCAGGCGGG CGAAGTGAAC ACCGGCGAAT TCGATCCGTT CGCGGCGTTG
ATTCCGCCCG CGAAGGCGGC CGGCGCGTGG GTGCACGTCG ACGGCGCATT CGGCCTGTGG
GCGCGCGCGT CGTCGAAGCG CGCGCTGACG GACGGCATCG ACGGCGCGGA CAGCTGGACG
ACCGACGGTC ACAAATGGCT CAACACGCCG TACGACGGCG CGATGGTGAT CTGTCGCGAC
GCGGCCGCGC TCGCCACCGC GATGAACAGC GACGCCGTCT ATCTGAGCGG CGCGCACGAT
GCGCAGAAGA ACCTGAACCT TGAATTCTCA CGCCGCGCGC GCGGCATTCC CGTGTGGGCC
GCATTGCGCT CGCTCGGCCG CGCCGGCGTC GCGACGATGA TCGAGCGGCA TTGCGCGCAG
GCGGCGCGGG TCGCCGACGG CCTGCGGGCG GCCGGCTACG ACGTGCTGAA CCGCGTCGTG
CTGAACCAGG TGCTCGTGCG CGCCGGCACC GACGAGGAAA CGGCGGCGAT CCTCGAAGCC
GCGCAGGCGT CGGGCGACGT GTGGTTCGGC GCGACCGTGT GGCAGGGGCG GCCGGCGTTC
CGGATCAGCG TGTCGTCGTG GCGCACCGAG GACGTGCACA TCGATCGTCT CGTTGCGTTG
CTGACGAAGC TGCGCGGCGT GCACGTGGGT TGA
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| Protein sequence | MDELSLLADA DRRAHAYLAA TNERRAFPDA AALAGLAAFD EPLPDAGRPA DDVLRLLDEH
GAPATVASNG PNYFGFVIGA TLPAAAAAER LMLAWDQCAS SYANSPVAAT LERQAARWVV
DALGLPEGSA VGFGTSATAC TLVALVAARR ALLARKGWDI DEDGLIGAPE VKVVISALAH
ITVKKALRVL GFGMKRIVVA PVDTHGRIDP AQLPPLDDMT IFCVQAGEVN TGEFDPFAAL
IPPAKAAGAW VHVDGAFGLW ARASSKRALT DGIDGADSWT TDGHKWLNTP YDGAMVICRD
AAALATAMNS DAVYLSGAHD AQKNLNLEFS RRARGIPVWA ALRSLGRAGV ATMIERHCAQ
AARVADGLRA AGYDVLNRVV LNQVLVRAGT DEETAAILEA AQASGDVWFG ATVWQGRPAF
RISVSSWRTE DVHIDRLVAL LTKLRGVHVG
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