| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4163 |
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| Symbol | |
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| ID | 6126996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 1098195 |
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| End bp | 1099016 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641651271 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001777804 |
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| Protein GI | 170736544 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.212071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCGC CGCTGCCGCC GATGTCTGCC CCGATTGCCG AAACGACACC TGAGACCGAA
GCCGCCGGCG AGCCGCGCGC GTCGCGCGTG CACCGGCCGG TCGCGCTCGT CACCGGCTCG
ACGTCGGGAA TCGGCGCGGC CGTCGCACGG CGTCTCGCGG CCGACGGCTA CGCGGTGATC
CTGCATTCGC GCAGCTCGGC CGACACCGGG CGGGCGATGG CACGCGAACT CGGCGGTGCA
TATGTGCAGG CCGATCTCGC CGACGATGCC GAGCGCGTGC GGCTGATCCG CGATGCGCTC
GCCGTGCACG GGCGGCTCGA CGTGCTCGTC AACAACGCGG GCGTCAGCCG CGTGATTCCG
CATGACGACC TCGCGGCGGC CACACCCGAC GTGTGGCGCG AAATGCATGA AATCAACGTG
ATCGCGCCGT TCCGGCTGGT GGCCGAAGCG GAGGCGGCGC TGCGCGAAGC GGCGTCGCAC
GGGCGGGCCG GGTGCGTCGT GAACGTTAGC TCGCATGCAG GCATGCGCCC GAAGGGCGCA
TCGATCCCGT ATGCGGCCGC GAAGGCCGCG CTCAATCACA CGACACGGCT GCTCGCCCGC
ACGCTCGCGC CGGCGATTCG CGTCAATGCG GTCGCGCCGG GGCTCGTCGA TACGCCGCTG
ACCGCCGACT GGACGGACGC GCAGCAGCTC TGGCGCGAGC GCGCGCCGAT GCGTCGCGCG
GCGACGCCGG ACGATATCGC GCAGACGGTC GCGATGCTCG TCGCCTCCGA TTACGTGACG
GGCGAGATCG TGATGCTCGA CGGCGGGTTG AATCTGACTT GA
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| Protein sequence | MDAPLPPMSA PIAETTPETE AAGEPRASRV HRPVALVTGS TSGIGAAVAR RLAADGYAVI
LHSRSSADTG RAMARELGGA YVQADLADDA ERVRLIRDAL AVHGRLDVLV NNAGVSRVIP
HDDLAAATPD VWREMHEINV IAPFRLVAEA EAALREAASH GRAGCVVNVS SHAGMRPKGA
SIPYAAAKAA LNHTTRLLAR TLAPAIRVNA VAPGLVDTPL TADWTDAQQL WRERAPMRRA
ATPDDIAQTV AMLVASDYVT GEIVMLDGGL NLT
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