| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4116 |
|---|
| Symbol | |
|---|
| ID | 6126949 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | - |
|---|
| Start bp | 1058857 |
|---|
| End bp | 1060149 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641651224 |
|---|
| Product | outer membrane efflux protein |
|---|
| Protein accession | YP_001777757 |
|---|
| Protein GI | 170736497 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1538] Outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCATTCG TTTTCCGCAC GCTGCGCATG CCGCGTGCAG GTCGGCGCGC GCCCGTACCG
TGGGCCGCGC TGCTGGTGGC GGGCGCCGTT CACGCGCAGC CGTCGTCGCT GACGCTGGAC
GCCGCGCTGC AGTCCGCCAC CGATCGTTCC GCGTCGATGC AGGCCGCGCA GGCTTCCGTG
CTCGCGCGTT CCGAAGCGGC CGTCAAGGCC GGCCAGTTGC CGGACCCGAT GCTCAAGGCC
GGCATCGACA ACCTGCCGGT CAACGGCGGG CAGCGCTTCA CCGTCGGTCA GGACTTCATG
ACGATGCGCC GCATCGGCAT CGAGCAGGAA TGGGTGTCCG GCGACAAGCG GCGGCTGCGT
ACCGCGCTGG CCGACGAACA GGTCGGCCGC GAGCGCGCCG GCTATCTCGT GCAACTCGCG
GCCGTGCGCC GGCAGACCGC GACGGCGTGG CTCGATGCCG TCTATGCGAA GCAGGCGCTC
GCGCTTCAGC AGGCGCTGCT CGGTCACATG AACCATGAAC TCGACGCGAC GCAGGCGTCG
TATCGCGGCG CGAAGGCGAG CGCGGGCGAC GTCGTGCAGG CCCGCGCGAT GCTCGCGCAG
ACGCAGGACC AGGTGCTCAA GGCACAGCAG GCGTATCGCA CCGCGCTCAT CGCGCTGGCC
CGCTGGACGG CGGTGCCCGT GACGGACGTG GCCGGTACGC CGCCCGCGCC CGAATCCTTC
GTATCGTCGT TGCCGCCGGA CGAACTGCGC CTGTCGCAGC CGGCGCTCGT CGCCGCCGCG
GACGATATCG CAGTGGCCGA AGCCGACGCC GCGGTCGCGA ACAGCGAGCG CAGCCCCAAC
TGGACGTGGG AAATCGCGTA CCAGCAGCGC GGCGGCGCGT ATTCGAACAT GGTGTCGGTC
GGCGTCTCGA TTCCGCTGCC GCTCAATCGC AAGAATCGCC AGAACCGCGA CGTCGCCGAA
AAGGCGGCGC TCGCGACGAA GGCGCGCCTG ATGTACGAGG ACACGCTGCG CCAGGTGCAG
GCCGACATCC GTACGCAATC GGACATGCTG GCGAGCGGCC GCGAACGCAT CGCGAACCTC
GGCGCCGCGC TGTTGCCGGC CGCCGACCAG CGCGTGCAGC TCGCGACGGC GGCGTACCGG
GCCGGCACGG GGTCGCTTGC CGACACGTTC GCCGCGCGGC GTGCGCAACT CGAAGCGCAA
TTACAGGTGC TCGACCTCAG GCGCGACGTG TCGCAGACCT GGGCACAGCT CGAATATCAG
GTCGTGCCGT CGGCGATGGC CGCCACGCAG TGA
|
|---|
| Protein sequence | MSFVFRTLRM PRAGRRAPVP WAALLVAGAV HAQPSSLTLD AALQSATDRS ASMQAAQASV
LARSEAAVKA GQLPDPMLKA GIDNLPVNGG QRFTVGQDFM TMRRIGIEQE WVSGDKRRLR
TALADEQVGR ERAGYLVQLA AVRRQTATAW LDAVYAKQAL ALQQALLGHM NHELDATQAS
YRGAKASAGD VVQARAMLAQ TQDQVLKAQQ AYRTALIALA RWTAVPVTDV AGTPPAPESF
VSSLPPDELR LSQPALVAAA DDIAVAEADA AVANSERSPN WTWEIAYQQR GGAYSNMVSV
GVSIPLPLNR KNRQNRDVAE KAALATKARL MYEDTLRQVQ ADIRTQSDML ASGRERIANL
GAALLPAADQ RVQLATAAYR AGTGSLADTF AARRAQLEAQ LQVLDLRRDV SQTWAQLEYQ
VVPSAMAATQ
|
|---|
| |