Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_4115 |
Symbol | |
ID | 6126948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 1057322 |
End bp | 1058845 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641651223 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_001777756 |
Protein GI | 170736496 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.997894 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAGGC AATCACTGAT GCGTGCGGCG CTGATCGCGT CCGCCGGCGC GGTGCTCGTC GGCGCCGGCT ATTTCGCGGG CGTTCGCCAT GCGACGAACG GCGTGGCGAC GGCCGCCATG CCCGCCGCTG CGCCGCCGGG TGTGCCGGCT CAGCAGGCCG CACGCAAGGT GCTGTACTGG CACGACCCGA TGGTGCCGAA CCAGCACTTC GACAAGCCGG GCAAATCGCC GTTCATGGAC ATGCAGTTGC AGCCGGTCTA TGCGGACGAA GGGGGCGCCG CGGCAGGCAT CCGGATCGAT CCGGGCCTGC AGCAGAACCT CGGCATCCGC TATGCGACCG TGCGTCGGCA GCAGACGGCG GCCGGCTTCG ACGCGGTGGG CACCACGCAG TTCGACGAAG CGCGTGCGGA GGTCGTGCAG TCGCGCGTCA CGGGCTACAT CGACCGTCTG TATGCACGCG CGCCGATGCA GCGCATCGCG AAGGGCGCGC CGGTCGCATC GCTGTTCGTG CCCGACTGGC TCGCGCCGCA GGAGGAATAT CTCGCGCTGA AGCGCGGCGG CATGGACGGC AACCTGCTCG ATGCGGCGCG CGCACGAATG CGCGCGCTGT CGATTCCGGA CGGCATGATC GCGACCCTCG ATCGCACCGG CCGCGCGCAG ACGCACGTCG TGCTGAGCGC GCCGGAGACG GGTGTCGTCA GCGAGCTGAA CGTGCGCGAC GGCGCGATGG TCGCGCCCGG CCAGACGCTC GCGAAGATCG CAGGGTTGTC GACGCTGTGG CTGATCGTCG AGGTGCCGGA AGCGCTCGCT TTGAACGTGC AGCCGGGAAT GTCGGTCGAC GCGACGTTCG CGGGCGATCC GGCACGGCAT TTCAGCGGAC GCATCCGCGA AGTGCTGCCC GGCATCAGCA CGGGCAGCCG CACGCTGCAG GCGCGTGTGG AGATCGACAA CGCATCGCTG AAGCTCACGC CCGGCATGCT GATGCGCGTG CGGGTCGCCG CGAAGGAGAC GGTGTCGCGC CTGCTCGTGC CGTCCGAGGC CGTGATCGCG ACCGGCCAGC GCACGATCGT CATCGCGAAG CTCGGCGACG GCCGGCTCCA GCCGGTGTCG GTGACGGTCG GCAACGACGT CGGCGGCGAC ACGGAAGTGC TCGGCGGGCT GAACGAAGGC GATACGGTCG TCGCATCGGG GCAGTTCCTG ATCGATTCGG AAGCCAGCCT GAAAAGCGTG CTGCCGCGGC TGGAGCGGGC GGCAGGCGCA AGCTCGGCCG CATCGTCCGC GACGGCAAGC GCGTCGGTCT ACGAAACCAC CGGCAAGGTG GAGAAGGTCA CCGCCGACGA CATCACGTTC TCGCATCAGC CGGTGCCGGC GCTCGGCTGG GGCGCGATGA CGATGGCGTT CGGCAAGCCG TCGGCGCACG CGTTTCCGGA CGTGAAGCCG GGGCAGACCG TGCGTTTCGC GTTCACGCAG ACCGACGACG GCTACCGGCT GACGAAGGTC GAGCCGCAGG GAGGTGAGCG ATGA
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Protein sequence | MTRQSLMRAA LIASAGAVLV GAGYFAGVRH ATNGVATAAM PAAAPPGVPA QQAARKVLYW HDPMVPNQHF DKPGKSPFMD MQLQPVYADE GGAAAGIRID PGLQQNLGIR YATVRRQQTA AGFDAVGTTQ FDEARAEVVQ SRVTGYIDRL YARAPMQRIA KGAPVASLFV PDWLAPQEEY LALKRGGMDG NLLDAARARM RALSIPDGMI ATLDRTGRAQ THVVLSAPET GVVSELNVRD GAMVAPGQTL AKIAGLSTLW LIVEVPEALA LNVQPGMSVD ATFAGDPARH FSGRIREVLP GISTGSRTLQ ARVEIDNASL KLTPGMLMRV RVAAKETVSR LLVPSEAVIA TGQRTIVIAK LGDGRLQPVS VTVGNDVGGD TEVLGGLNEG DTVVASGQFL IDSEASLKSV LPRLERAAGA SSAASSATAS ASVYETTGKV EKVTADDITF SHQPVPALGW GAMTMAFGKP SAHAFPDVKP GQTVRFAFTQ TDDGYRLTKV EPQGGER
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