Gene Bcenmc03_4115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_4115 
Symbol 
ID6126948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp1057322 
End bp1058845 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content69% 
IMG OID641651223 
ProductRND family efflux transporter MFP subunit 
Protein accessionYP_001777756 
Protein GI170736496 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.997894 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAGGC AATCACTGAT GCGTGCGGCG CTGATCGCGT CCGCCGGCGC GGTGCTCGTC 
GGCGCCGGCT ATTTCGCGGG CGTTCGCCAT GCGACGAACG GCGTGGCGAC GGCCGCCATG
CCCGCCGCTG CGCCGCCGGG TGTGCCGGCT CAGCAGGCCG CACGCAAGGT GCTGTACTGG
CACGACCCGA TGGTGCCGAA CCAGCACTTC GACAAGCCGG GCAAATCGCC GTTCATGGAC
ATGCAGTTGC AGCCGGTCTA TGCGGACGAA GGGGGCGCCG CGGCAGGCAT CCGGATCGAT
CCGGGCCTGC AGCAGAACCT CGGCATCCGC TATGCGACCG TGCGTCGGCA GCAGACGGCG
GCCGGCTTCG ACGCGGTGGG CACCACGCAG TTCGACGAAG CGCGTGCGGA GGTCGTGCAG
TCGCGCGTCA CGGGCTACAT CGACCGTCTG TATGCACGCG CGCCGATGCA GCGCATCGCG
AAGGGCGCGC CGGTCGCATC GCTGTTCGTG CCCGACTGGC TCGCGCCGCA GGAGGAATAT
CTCGCGCTGA AGCGCGGCGG CATGGACGGC AACCTGCTCG ATGCGGCGCG CGCACGAATG
CGCGCGCTGT CGATTCCGGA CGGCATGATC GCGACCCTCG ATCGCACCGG CCGCGCGCAG
ACGCACGTCG TGCTGAGCGC GCCGGAGACG GGTGTCGTCA GCGAGCTGAA CGTGCGCGAC
GGCGCGATGG TCGCGCCCGG CCAGACGCTC GCGAAGATCG CAGGGTTGTC GACGCTGTGG
CTGATCGTCG AGGTGCCGGA AGCGCTCGCT TTGAACGTGC AGCCGGGAAT GTCGGTCGAC
GCGACGTTCG CGGGCGATCC GGCACGGCAT TTCAGCGGAC GCATCCGCGA AGTGCTGCCC
GGCATCAGCA CGGGCAGCCG CACGCTGCAG GCGCGTGTGG AGATCGACAA CGCATCGCTG
AAGCTCACGC CCGGCATGCT GATGCGCGTG CGGGTCGCCG CGAAGGAGAC GGTGTCGCGC
CTGCTCGTGC CGTCCGAGGC CGTGATCGCG ACCGGCCAGC GCACGATCGT CATCGCGAAG
CTCGGCGACG GCCGGCTCCA GCCGGTGTCG GTGACGGTCG GCAACGACGT CGGCGGCGAC
ACGGAAGTGC TCGGCGGGCT GAACGAAGGC GATACGGTCG TCGCATCGGG GCAGTTCCTG
ATCGATTCGG AAGCCAGCCT GAAAAGCGTG CTGCCGCGGC TGGAGCGGGC GGCAGGCGCA
AGCTCGGCCG CATCGTCCGC GACGGCAAGC GCGTCGGTCT ACGAAACCAC CGGCAAGGTG
GAGAAGGTCA CCGCCGACGA CATCACGTTC TCGCATCAGC CGGTGCCGGC GCTCGGCTGG
GGCGCGATGA CGATGGCGTT CGGCAAGCCG TCGGCGCACG CGTTTCCGGA CGTGAAGCCG
GGGCAGACCG TGCGTTTCGC GTTCACGCAG ACCGACGACG GCTACCGGCT GACGAAGGTC
GAGCCGCAGG GAGGTGAGCG ATGA
 
Protein sequence
MTRQSLMRAA LIASAGAVLV GAGYFAGVRH ATNGVATAAM PAAAPPGVPA QQAARKVLYW 
HDPMVPNQHF DKPGKSPFMD MQLQPVYADE GGAAAGIRID PGLQQNLGIR YATVRRQQTA
AGFDAVGTTQ FDEARAEVVQ SRVTGYIDRL YARAPMQRIA KGAPVASLFV PDWLAPQEEY
LALKRGGMDG NLLDAARARM RALSIPDGMI ATLDRTGRAQ THVVLSAPET GVVSELNVRD
GAMVAPGQTL AKIAGLSTLW LIVEVPEALA LNVQPGMSVD ATFAGDPARH FSGRIREVLP
GISTGSRTLQ ARVEIDNASL KLTPGMLMRV RVAAKETVSR LLVPSEAVIA TGQRTIVIAK
LGDGRLQPVS VTVGNDVGGD TEVLGGLNEG DTVVASGQFL IDSEASLKSV LPRLERAAGA
SSAASSATAS ASVYETTGKV EKVTADDITF SHQPVPALGW GAMTMAFGKP SAHAFPDVKP
GQTVRFAFTQ TDDGYRLTKV EPQGGER