| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4055 |
|---|
| Symbol | |
|---|
| ID | 6126888 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | + |
|---|
| Start bp | 990522 |
|---|
| End bp | 991469 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641651163 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001777696 |
|---|
| Protein GI | 170736436 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAAAT TCAAGATCCC CAACATGGGC GCGCTCGTGG CTTTCGAAGC CGCCGCCCGC
CACGAGAGCT TCACGCACGC GGCCAAGGAG CTGTTCCTGA CCGAAAGCGC CGTGTCGCGG
CAGATCGCGA CGCTGGAGGC GAGCCTCGGC GTGCGGCTGT TCGCGCGCGT GAAGCAGCGC
GTCGTGCTGA CGCGCGCCGG CAAGCTGTAC GGCACGCAGG TGCGGCGCGC GCTCGAAACG
CTCGACCGCG ACACGCTGTC GATCATCGCG CACGGCAGCG GCGGCGGCTA CCTGGAACTC
GCGGTGCTGC CGACCTTCGC GTCGCACTGG CTGATCCCGC GCATCAAGAG CTTCTACGAC
CGCACGCCCG ACGTGCGCGT GAACATGGGC AGCCGCACCG ACCTGTTCTC GTTCGAGGAC
ACGCACTTCG AAGCCGCGAT CCACTACGGC AAGCCGACCT GGCCCGGCAC GTCGTCCGAC
TACCTGTTCG GCGAGGAAGT CGTGCCGATC TGCTCGCCCG CGCTGCTGAA CGGGCCGGTC
GAGCGCGTCG AGGATCTGCT CGCGTATCCG CTGCTGCACT CGACGACGCG CCCCGGCGCG
TGGGCGCAGT GGTTCGAGAC GCACGGCGTC GAGGACATCC GCACGATGCA GGGCGTGCGC
TACGAACTGC ATACGATGCT GATCAGCGCG GCCGCGGCCG GGCTCGGCGT CGCGCTCGTG
CCGAAGTTCT TCGTCGAGGA ACAGTTGCAG CAGCTCGGGC TCGTCGTGCC GTGCGACGCG
GCAACCGTCG GCGATTCGGC GTACTACCTC GTGTATCCGA CCGAGTTCAG CCACAGCAAG
CCGCTGGAAT CGTTCCGCGG CTGGCTGCTC GAACAGGCGA GCGCGTATGC AGCGCCGGAA
CGCGACGTGC AAGACGCCGA TGAAGAGGAT GACGAAGACG TCGAGTAA
|
|---|
| Protein sequence | MRKFKIPNMG ALVAFEAAAR HESFTHAAKE LFLTESAVSR QIATLEASLG VRLFARVKQR
VVLTRAGKLY GTQVRRALET LDRDTLSIIA HGSGGGYLEL AVLPTFASHW LIPRIKSFYD
RTPDVRVNMG SRTDLFSFED THFEAAIHYG KPTWPGTSSD YLFGEEVVPI CSPALLNGPV
ERVEDLLAYP LLHSTTRPGA WAQWFETHGV EDIRTMQGVR YELHTMLISA AAAGLGVALV
PKFFVEEQLQ QLGLVVPCDA ATVGDSAYYL VYPTEFSHSK PLESFRGWLL EQASAYAAPE
RDVQDADEED DEDVE
|
|---|
| |