Gene Bcenmc03_4047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_4047 
Symbol 
ID6126880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp983173 
End bp984324 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content66% 
IMG OID641651155 
Productextracellular ligand-binding receptor 
Protein accessionYP_001777688 
Protein GI170736428 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTCC GCATTCGTTC GCTTTCCGGC GTCGCCTTGA CCGCCGCGCT TCTCGCGTTC 
CAGACGGGCG CGGCCCATGC GCAGGAGACG ATCGTCAAGG TCGGCGTGGC CGGCCCGCTG
ACGGGCGGCG GCGCCGCCTA CGGGAAAGAC ATCGAGAACG GCGTGCGCAT GGCGGTCGAC
GAAGCGAATG CCGCGCGCAC GATGGTCGGC GGCAAGCCGG TGAAATTCGT CATCGCGTCG
CAGGACGACC AGAGCGATCC GCGCACCGGC GTGCAGGCCG CGCAGCAACT CGCCGACGCG
CAGGTGGCCG TCGTGATCGG CCACTTCAAT TCCGGCACGA CGCTGCCCGC GTCGAAGATC
TACGCGAAGG CCGGCATTCC GATGATCACG CCGTCAGCGA CCAATCCCGA CATCACGCGC
GCCGGGCTCG GCACCGTGTA CCGCGTGATC GCGACCGATA CGCAAAACGC GGGCAACGCC
GGTGCGTACG CCGCGAGCGT GACGAAGGCG AAGCGCATCG CGATCATCGA CGATCGCACC
GCGTTCGGCC AGGGCGAAGC CGACGAATTC GAGAAGGCCG TGAAGGCGAA CGGCGGCACG
ATCGTCACGC GCGAATTCAC GAACGACAAG GCCGTCGACT TCAGCGCGCA GCTCACGAAG
ATCAAGAGCA CCAACGCCGA TCTCGTGTTC TTCGGCGGCC TCGACGCACA GGCCGCGATG
CTCGTGAAGC GCATGCGCCA GCTCGGCATC CGCGCGCAGT TCCTCGCGGG CGGCGGCGTG
ATGAACGCGA ACTTCATCAA GCTGGCCGGC AATGCGGCCG AAGGCGCATC GGTGTGGGAA
TACGGGCAGC CGCTGTCGCG TCTCGCGAAG GGCAAGCTGT TCGAAACGAA ATTCAAGCAG
AAGTACGGCG TCGACATGCT CGCGTATGCG CCGTTCGCGT ACGACGCGAC GTGGATCGCG
ATCAACGCGA TGCAGAAGGC GAATTCGACG AAGCCGGCCG ATTTCAACGG CGCACTGAAG
GGCACGCGCT ACGACGGCAT CACGGGCACC ATCGCGTTCA CGAACACGGG CGACCTGAAG
AATCCGAGCT CGACGCTGTA TGAAGTGAAG AACGCCGCGT GGCAGCCCGT CACGACCCAG
TCGGCGGACT GA
 
Protein sequence
MTFRIRSLSG VALTAALLAF QTGAAHAQET IVKVGVAGPL TGGGAAYGKD IENGVRMAVD 
EANAARTMVG GKPVKFVIAS QDDQSDPRTG VQAAQQLADA QVAVVIGHFN SGTTLPASKI
YAKAGIPMIT PSATNPDITR AGLGTVYRVI ATDTQNAGNA GAYAASVTKA KRIAIIDDRT
AFGQGEADEF EKAVKANGGT IVTREFTNDK AVDFSAQLTK IKSTNADLVF FGGLDAQAAM
LVKRMRQLGI RAQFLAGGGV MNANFIKLAG NAAEGASVWE YGQPLSRLAK GKLFETKFKQ
KYGVDMLAYA PFAYDATWIA INAMQKANST KPADFNGALK GTRYDGITGT IAFTNTGDLK
NPSSTLYEVK NAAWQPVTTQ SAD