| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3999 |
|---|
| Symbol | |
|---|
| ID | 6126832 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | + |
|---|
| Start bp | 934245 |
|---|
| End bp | 934766 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641651107 |
|---|
| Product | putative PTS IIA-like nitrogen-regulatory protein PtsN |
|---|
| Protein accession | YP_001777640 |
|---|
| Protein GI | 170736380 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0822652 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACGC ATCAGGTCGC CGTCGGCGGC CAACCCACCC TCCCTCACCG ACGCGGCGGC
TTGCCATTCG TGCCCCGGCT CGCCGATGCC TGTCCGCCGG ACAACATCCT GCTCGATGTG
CCCGTGGAAG GCGCGATTCA ATTGTTCGAC CTCGTCGCAT GCCATGTCGC GCGCGGCAGC
GGCGTATCCG CGGAGCGGAT CGGGGCCGAA CTGATCAAGC GCGAACGACT CGGCTCGACC
GGCCTCGGGC AAGGCGTCGC GATTCCGCAT GCGCGCGTCG ACGGGCTCGG TTCGGCCGTC
GCGCTGTTCG TCCGCGCGCG GCACCCGTTC GTGTTCAATG CGCCGGATCA CAAGCCCGTG
GGCGAATTCG TCGTGCTGGT GCTGCCGCTC GCGGACGACC GCGCGCACCT CGAACTGCTC
GCCAACGCCG CGCGATGGTT CAGCGAACGC GCGATCCGGC AGGCGGCGCG CGACGCGCAA
ACGTCCGACG AGATTTACCG GCTCATGCAA CGCGCGGTTT GA
|
|---|
| Protein sequence | MQTHQVAVGG QPTLPHRRGG LPFVPRLADA CPPDNILLDV PVEGAIQLFD LVACHVARGS
GVSAERIGAE LIKRERLGST GLGQGVAIPH ARVDGLGSAV ALFVRARHPF VFNAPDHKPV
GEFVVLVLPL ADDRAHLELL ANAARWFSER AIRQAARDAQ TSDEIYRLMQ RAV
|
|---|
| |