Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_3990 |
Symbol | |
ID | 6126823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 925394 |
End bp | 926500 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641651098 |
Product | nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein |
Protein accession | YP_001777631 |
Protein GI | 170736371 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0658463 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCCA CACTCTCCCT CGCGTCGCGG CATCGCCCGC TGCGCGCGCT GCTCGCCGCG CTGCCATTGG CCGTCGCATC GCTCGTCACG CCCGCCGCCC ACGCGCAAGA CGCGCCCAAG GTCGTGCGGA TCGCCGTCGT CGCGTATTCG AGCGGCGGCA AGACGCAATA CGCGGGCGCA TCCGCGCTGA TCGACGCCGA CAAGTCGCTC GAAAAAGCGC TCGCCGCGCG ACACGTGACG TTGCAATGGG TGCCGGTGTC GACCGCCGCG GTCGGCACGC TCGTCAACGA GGCATTCACG AACGGCAGCA TCGATTTCGC CGGCTACGGC GACCTGCCGT CGGTGGTCGT CAACGCGTCG GGCACGCACA CGCGCCTGAT CGTGCCGGGC GGCGTCGGCA ACAATACCTA TCTGGTCGTG CCGGCCGGCT CGAGCGCGAA GTCGATTGTC GACCTCAAGG GCAAGCGCAT CGCCCTCAAT CGCGGCCGGC CGTGGGAAGT GCCGTTCAGC AAGCTGCTCG CCGAGAACGG GCTGAAGCTG TCCGACTTCA GGATCTACAA CCTCGATCCG CAGGCCGGCG CGGCGGCCGT CGCGGCCGGC CGCGTCGACG GCTTCTTCAC GCTGTCCGAC GCGTATTCGC TCGTCGACAA AAACGTCGGC AAGATCATCT GGTCGACCAA GCGCGCGCCC GACGACTGGA AGATGCGCGC GGAACTGTGG GCGTCCGACG ATTTCGTGCG GCGCTACCCC GACATCACGC AGATCGTCGC GACGGCCTAC GTCCGGGCCG CGCACTGGAT CTCGCAGCCG CAGAACCGCG ACGCGTACGT GAAGATCCTG AGCGCGTCCG GCCAGCCAGA AAGCGTCGTC CGCCGCGAAT ACGCGGACGA AGCGACGCCG TGGAAGGAGC AATGGACGCC GCTGTTCACG CCGGCGTTGA CCGGCCATTA CCGCGATGTC GTCGCGTACA GCCGCCAGGC CGGGCTGACG TCCGCGCCGG TCGACGTGAA TGCGCTGCTC GCGCCGACCT TCGTGTCGAC CGCGCTCAAG CAGCTCGGCC TCGACGGCTA CTGGCGCGCC GACGCCCCGC GCGTCGCGAG CCGCTGA
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Protein sequence | MKPTLSLASR HRPLRALLAA LPLAVASLVT PAAHAQDAPK VVRIAVVAYS SGGKTQYAGA SALIDADKSL EKALAARHVT LQWVPVSTAA VGTLVNEAFT NGSIDFAGYG DLPSVVVNAS GTHTRLIVPG GVGNNTYLVV PAGSSAKSIV DLKGKRIALN RGRPWEVPFS KLLAENGLKL SDFRIYNLDP QAGAAAVAAG RVDGFFTLSD AYSLVDKNVG KIIWSTKRAP DDWKMRAELW ASDDFVRRYP DITQIVATAY VRAAHWISQP QNRDAYVKIL SASGQPESVV RREYADEATP WKEQWTPLFT PALTGHYRDV VAYSRQAGLT SAPVDVNALL APTFVSTALK QLGLDGYWRA DAPRVASR
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