Gene Bcenmc03_3990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3990 
Symbol 
ID6126823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp925394 
End bp926500 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content69% 
IMG OID641651098 
Productnitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein 
Protein accessionYP_001777631 
Protein GI170736371 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0658463 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCCA CACTCTCCCT CGCGTCGCGG CATCGCCCGC TGCGCGCGCT GCTCGCCGCG 
CTGCCATTGG CCGTCGCATC GCTCGTCACG CCCGCCGCCC ACGCGCAAGA CGCGCCCAAG
GTCGTGCGGA TCGCCGTCGT CGCGTATTCG AGCGGCGGCA AGACGCAATA CGCGGGCGCA
TCCGCGCTGA TCGACGCCGA CAAGTCGCTC GAAAAAGCGC TCGCCGCGCG ACACGTGACG
TTGCAATGGG TGCCGGTGTC GACCGCCGCG GTCGGCACGC TCGTCAACGA GGCATTCACG
AACGGCAGCA TCGATTTCGC CGGCTACGGC GACCTGCCGT CGGTGGTCGT CAACGCGTCG
GGCACGCACA CGCGCCTGAT CGTGCCGGGC GGCGTCGGCA ACAATACCTA TCTGGTCGTG
CCGGCCGGCT CGAGCGCGAA GTCGATTGTC GACCTCAAGG GCAAGCGCAT CGCCCTCAAT
CGCGGCCGGC CGTGGGAAGT GCCGTTCAGC AAGCTGCTCG CCGAGAACGG GCTGAAGCTG
TCCGACTTCA GGATCTACAA CCTCGATCCG CAGGCCGGCG CGGCGGCCGT CGCGGCCGGC
CGCGTCGACG GCTTCTTCAC GCTGTCCGAC GCGTATTCGC TCGTCGACAA AAACGTCGGC
AAGATCATCT GGTCGACCAA GCGCGCGCCC GACGACTGGA AGATGCGCGC GGAACTGTGG
GCGTCCGACG ATTTCGTGCG GCGCTACCCC GACATCACGC AGATCGTCGC GACGGCCTAC
GTCCGGGCCG CGCACTGGAT CTCGCAGCCG CAGAACCGCG ACGCGTACGT GAAGATCCTG
AGCGCGTCCG GCCAGCCAGA AAGCGTCGTC CGCCGCGAAT ACGCGGACGA AGCGACGCCG
TGGAAGGAGC AATGGACGCC GCTGTTCACG CCGGCGTTGA CCGGCCATTA CCGCGATGTC
GTCGCGTACA GCCGCCAGGC CGGGCTGACG TCCGCGCCGG TCGACGTGAA TGCGCTGCTC
GCGCCGACCT TCGTGTCGAC CGCGCTCAAG CAGCTCGGCC TCGACGGCTA CTGGCGCGCC
GACGCCCCGC GCGTCGCGAG CCGCTGA
 
Protein sequence
MKPTLSLASR HRPLRALLAA LPLAVASLVT PAAHAQDAPK VVRIAVVAYS SGGKTQYAGA 
SALIDADKSL EKALAARHVT LQWVPVSTAA VGTLVNEAFT NGSIDFAGYG DLPSVVVNAS
GTHTRLIVPG GVGNNTYLVV PAGSSAKSIV DLKGKRIALN RGRPWEVPFS KLLAENGLKL
SDFRIYNLDP QAGAAAVAAG RVDGFFTLSD AYSLVDKNVG KIIWSTKRAP DDWKMRAELW
ASDDFVRRYP DITQIVATAY VRAAHWISQP QNRDAYVKIL SASGQPESVV RREYADEATP
WKEQWTPLFT PALTGHYRDV VAYSRQAGLT SAPVDVNALL APTFVSTALK QLGLDGYWRA
DAPRVASR