Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_3986 |
Symbol | |
ID | 6126819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 920741 |
End bp | 921541 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 641651094 |
Product | TonB family protein |
Protein accession | YP_001777627 |
Protein GI | 170736367 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.152676 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGGGC TGACGATCGA ATACGGCGTG CCGCCCGCAC GCCGGCATGC GGCACGTGCG GCGCCGCGCA CGGTGGCGGC GGTTGCGCGG CCGCCGTCGC TGCCGCCGTC CGCGCAGGTC GACGCACGGG CCGCACCGGC GAACGGATGG CGTGGCGCGG CGGCGATTGC GCTGGCGATC GCGGCGCTGC ATGCGGGCGT CGTGCTGCTG GCTGCGCGCG TGCCTGCCGC ACCGCCCGTG CAGCCGCCGC GGCCGCTGCC GATGACGGTC GAGCTGACGC GGCCGCCCGA ACCGCTGCCG CAGGCCGCGC ATCCGCCGCC GCCGGTCGTG CCGCCGAAGC CGTTGAAGCA GGCGCCGACC CCGCCGAAGC CGCGCGCGGC CGTACCGCGT CCGGCGCCGG CTGCCACGCC GCAGGCGACG CGCGAAGCCG CACCTGCACC CGTGACGGCG ACGCCGGCCG TCGCCGCGCC CGCTGCTCCG GTTCAGGCGC CCGCACCCGC ACCTGCCGCA CCGGTGCGCG AAACCGCGCC GATCGGCGAC GCGGCGTACC TGCGCAACCC GGCGCCCGAC TATCCGGCGT TCGCGCAGGA CCAGGGCTGG GAAGGGCGCG TCGTGCTGCG CGTGCACGTG CTCGCGAGCG GCACGCCCGA TTCGGTCGAG GTCCGCACGA GCAGCGGCCG CCGGCTGCTC GACAGCGCGG CCGTGGCCGC CGTGAAGCGC TGGACCTTCG TGCCCGCGAA GCGCGGCGAC GAAGCGGTCG ACGGCTGGGT CAACGTGCCG ATCGATTTCA AGCTGGGCTG A
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Protein sequence | MTGLTIEYGV PPARRHAARA APRTVAAVAR PPSLPPSAQV DARAAPANGW RGAAAIALAI AALHAGVVLL AARVPAAPPV QPPRPLPMTV ELTRPPEPLP QAAHPPPPVV PPKPLKQAPT PPKPRAAVPR PAPAATPQAT REAAPAPVTA TPAVAAPAAP VQAPAPAPAA PVRETAPIGD AAYLRNPAPD YPAFAQDQGW EGRVVLRVHV LASGTPDSVE VRTSSGRRLL DSAAVAAVKR WTFVPAKRGD EAVDGWVNVP IDFKLG
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