Gene Bcenmc03_3984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3984 
Symbol 
ID6126817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp919574 
End bp919984 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content69% 
IMG OID641651092 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_001777625 
Protein GI170736365 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.357601 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.130758 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTCT CGTCCTCCTC CGACAACGAC GACGTGCTCA GCGAAATCAA CATCACGCCG 
CTCGTCGACG TGATGCTCGT GCTGCTCGTC GCATTCATCG TCACCGCGCC GCTGCTGAAC
AACGCGGTGC ACGTGACGCT CCCGAACACC GTCGCCACCG CACCGGCCGA CCGCAAGCCG
AACGTGACCG TGAGCGTCGA CGGCAACGGC GTCGTGTATC TCGACAAGCG CGCGGTCGCG
CTCGACACGG TACCGGCCGA GCTGGCCGCG CTGAAGGCCG GCCGGCCCGA CGTCGCGCTC
GACCTGCAGG CCGACGAGCA CGTGCCGTAC GGCACCGTCG CGAAGCTGAT GGCCGCGATC
GAGCACGCGG GCATCACGCG GCTGTCGGTG CTCACCGCGC CGCGCGGCTG A
 
Protein sequence
MAFSSSSDND DVLSEINITP LVDVMLVLLV AFIVTAPLLN NAVHVTLPNT VATAPADRKP 
NVTVSVDGNG VVYLDKRAVA LDTVPAELAA LKAGRPDVAL DLQADEHVPY GTVAKLMAAI
EHAGITRLSV LTAPRG