Gene Bcenmc03_3978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3978 
Symbol 
ID6126811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp911116 
End bp912423 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content69% 
IMG OID641651086 
Productmajor facilitator transporter 
Protein accessionYP_001777619 
Protein GI170736359 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0632064 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA CCGCCCCGCA GTTGCACGCC GCGACGATGC GGCGCCTGAA CCTGCGCCTG 
ATTCCGTTCC TGATGCTGCT GTACCTCGTC GCGTATATCG ACCGCTCGAA CATCTCGGTC
GCGGCGTTGC AGATGAACGC CGACCTCGGC CTCAGCGCCG AAATGTACGG GCTCGGCGCG
GGGCTGTTCT ACGTGACCTA CATCCTGTTC GAGGTGCCGA GCAACCTGTT CCTCGCGCGG
GTCGGCGCAC GCCGCTGGAT CGCGCGGATC ATGATCACGT GGGGCATCGT CGCTGCCGCG
ATGAGCGCGG TGCAGACACC GGGGCAGCTC TACGCGATGC GCCTGCTGCT CGGCGCGGCC
GAAGCCGGCT TCACGCCGGG CATCATCTAC TACCTGTCCG CGTGGTATCC GCAGAGCGAC
CGGGCGCGTG CGATGTCGTT CTTTTATATC GGCGCGACGC TCGCGTCGGT GATCGGGCTG
CCGCTGTCCG GCGCGCTGCT GAACCTGAAC GGCGTGCTCG GCGTCGAGGG CTGGCGCTGG
CTGTTCCTGC TCGAAGGCGT GCCCGCGCTG CTGCTCGGGT TCGTCGTGCT GCGCCGCCTG
CCCGATACGC CGGCGCACGC GCGCTGGCTG CCGGCCGACG AGCGCGCGTG GCTCGAAGCG
ACGCTGCGCG ACGGCGCGCC GCGCGAGCAT CTGTCGCATG GCGTCGCATT GCGGCGTGCG
TTCGGCGACG GCAAGGTGTG GGCGCTCGCC GCGTTCTGGT TGTTGCAGGC GTTCGGCACG
ATCGGCCTGA CGTTGTTCCT GCCGCTGCTC GTGAAGAGCC TGTCGGGGCA GTCGAGTTTC
GCGGTCGGCA GCCTGTCCGC GCTGCCGTTC CTGTTCGCAT GCGTCGCGAT GTATCTAAAT
GGCCGGCATT CGGATCTCGG CGGCGAACGC GCGCTGCATC TCGGCGTGCC GATGCTGTTG
GCCGGTGCGT TGCTGGTCGC GGCGATCTAC ACGCCGGTGC TGCCCGTCGC GTATGCGCTG
CTGGTATTCG CGGTCGGCTT GAATTGGGCG GCGACGCCGG TGTTCTGGGC CGTGACGACC
GAATACGTGT CGGGCCTCAC GGCGGCCGCG TCGATCGCGC TGATCAACGC GGTCGCGAAC
ATCGCGGGGC TCGCGCTGCC GCCGGTGATG GGGCGGATCA AGGACGTCAC GCATTCGTAC
GATCTCGCGC TGCTGCTCGT CGCGGTCGCG TTGCTGGCGG GCGGTGTGCT CGCGTTGCGG
ATCGCGTCGC GGCGCGCGAT GCCGGTGGTG GCAGGGCGGG TGGGGTGA
 
Protein sequence
MTATAPQLHA ATMRRLNLRL IPFLMLLYLV AYIDRSNISV AALQMNADLG LSAEMYGLGA 
GLFYVTYILF EVPSNLFLAR VGARRWIARI MITWGIVAAA MSAVQTPGQL YAMRLLLGAA
EAGFTPGIIY YLSAWYPQSD RARAMSFFYI GATLASVIGL PLSGALLNLN GVLGVEGWRW
LFLLEGVPAL LLGFVVLRRL PDTPAHARWL PADERAWLEA TLRDGAPREH LSHGVALRRA
FGDGKVWALA AFWLLQAFGT IGLTLFLPLL VKSLSGQSSF AVGSLSALPF LFACVAMYLN
GRHSDLGGER ALHLGVPMLL AGALLVAAIY TPVLPVAYAL LVFAVGLNWA ATPVFWAVTT
EYVSGLTAAA SIALINAVAN IAGLALPPVM GRIKDVTHSY DLALLLVAVA LLAGGVLALR
IASRRAMPVV AGRVG