| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3977 |
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| Symbol | |
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| ID | 6126810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 910235 |
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| End bp | 910954 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641651085 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001777618 |
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| Protein GI | 170736358 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0505376 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCCC GCACTTATCT CGTCACCGGC GCATCACGCG GCATCGGCCT CGCGATCAGC
ACCACGCTCG CTCGACGCGG CCATCGCGTC GTCGGTCTCG CGCGGCATGC GCAGGGCATC
GACTTCCCCG GCGAATTGCT CGCGTGCGAT CTCGCCGATA TCGAGCAGAC CGCCGCGACG
CTCGCACGGA TCGGCGAACA CCACCATGTC GACGGCATCG TCAACAACGC GGGCATCGTG
TTGCCCCAAC CGCTCGGGAA GATCGATTTC CAGTCGCTGC AGATCGTGTT CGATCTCAAC
GTGCGGGCCG CGATCCAGGT CACGCAGCAT TTTGCCGATG CGATGAAGGC GCGTGGCCAC
GGGCGCATCG TCAACATCTG CAGCCGCGCG ATCTTCGGCA GCCTCGACCG CACCGCGTAT
TCCGCCGCGA AGAACGCGCT GGTCGGCTGC ACGCGCACGT GGGCGCTCGA ACTCGCCGAG
CACGGCGTGA CCGTCAACGC GGTGGCGCCC GGCCCGATCG AGACGGAACT GTTCCGCCAG
ACGCGGCCGG TCGGCAGCGA AGCCGAGCGC AAGGTGCTCG CGACGATTCC CGCGCGCCGC
CTCGGCACGG CCGACGACGT CGCGGCCGCC ACCGTGTTTT TCTTGTCGGA CGAAGCCGGT
TTCGTCACCG GGCAGGTGCT GTCGGTGGAC GGCGGCGGCA GCCTCGGCGG GCGCAGTTGA
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| Protein sequence | MSSRTYLVTG ASRGIGLAIS TTLARRGHRV VGLARHAQGI DFPGELLACD LADIEQTAAT
LARIGEHHHV DGIVNNAGIV LPQPLGKIDF QSLQIVFDLN VRAAIQVTQH FADAMKARGH
GRIVNICSRA IFGSLDRTAY SAAKNALVGC TRTWALELAE HGVTVNAVAP GPIETELFRQ
TRPVGSEAER KVLATIPARR LGTADDVAAA TVFFLSDEAG FVTGQVLSVD GGGSLGGRS
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