| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3976 |
|---|
| Symbol | |
|---|
| ID | 6126809 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | - |
|---|
| Start bp | 908128 |
|---|
| End bp | 910098 |
|---|
| Gene Length | 1971 bp |
|---|
| Protein Length | 656 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641651084 |
|---|
| Product | sulfatase |
|---|
| Protein accession | YP_001777617 |
|---|
| Protein GI | 170736357 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3119] Arylsulfatase A and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0677618 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGT CCGCGTCGCC GTTGCATGCT TTTCGTTTCC GTGTCGTCTG CGCCGCGATT
GCCGGCGCGG TGTCGCTCGC GTCGTGCGGC GGCGTCGACA GCGATGCGCC GCCGTCGCAG
GCCGGCGTCA CGCCGACGCC TACCCCGACC CAGGCCGCGA AACGCCCGAA CATCCTGTAC
ATCATGGCCG ACGATCTCGG CTATTCCGAC ATCCATGCGT TCGGCGGCGA GATCAACACG
CCGAACCTCG ACGCGCTCGT CGCATCGGGC CGCATCCTGT CGAACCATCA CACGGGCACC
GTCTGCGCGA TCACGCGCGC GATGCTGGTG TCCGGCACCG ATCACCATCT CGTCGGCGAA
GGCACGATGG GCGTGCCGAC CGACGAGCGG CGCGGGCTGC CCGGCTACGA GGGCTACCTG
AACGATCGCG CGCTGTCGTT CGCGCAACTG CTGAAGGACG CCGGCTATCA CACGTATATC
GCGGGCAAGT GGCACATCGG CTCGGGCATC GTCGGCAGTA CGACGGGCAG CGGGCAGACG
CCCGACCAGT GGGGCTTCGA GCGCAGTTAC GTGCTGCTCG GCGGCGCGGC GACGAACCAC
TTCGCGCACG AGCCGGCCGG CTCGTCGAAC TACACGGAAG ACGGCCGCTA CGTGCAGCCG
GGCCAGCCCG GGCAGCCGGG CGGCACGGGC GGCAGCCCGG CCGTGTTCTA TTCGACCGAT
TTCTATACGC AGAAGCTGAT CTCGTACATC GATGCGAACA AGCAGGACGG CAAGCCGTTC
TTCGCGTACG CGGCCTACAC GTCGCCGCAC TGGCCGCTGC AGGTGCCCGA TCCGTGGCTG
CACAAATATG CGGGCGTGTA CGACGCCGGC TACGATGCGA TCCGCAACGC GCGGATCGCG
CGGCAGAAGG CACTCGGCCT GATTCCGGCC GATTTCAAGC CGTTCGACGG GCTGCCCGAG
ACGACGGTCG CCTCGCCCGC GACCGCGAAC AACGGCACGG CCAGCGCGAA GTACATCAAC
GCGGTGCATT CGGCCGCCGA CGGCTACAGC GACTACGGCC CCGGCAAGGT CGACAAGCTG
TGGTCGAGCC TGTCGCCGGC CGAACGCAAG GCGCAGGCGC GCTACATGGA GATCTACGCG
GGGATGGTCG AGAACCTCGA CTACAACATC GGCCTGCTGA TCCAGCACCT GAAGGACATC
GGCGAATACG ACAACACGTT CATCATGTTC CAGTCGGACA ACGGCGCGGA AGGCTGGCCG
ATCGATTCCG GCGCCGACCC GACCGCCACC GACACCGCGA ACGCGCAGGA GCCGACCTAT
TCGGCGCTCG GCACCGACAA CGGCAAGCAG AATGCGCAGC GCCTGCAGTA CGGGCTGCGC
TGGGCCGAAG TGAGCGCGGC GCCGTTCCGG CTCACGAAGG GCTATTCGGG CGAAGGCGGC
GTATCGACGC CGACGATCGT GCACCTGCCG GGCCAGTCGC AATCGTTGCC GACGCTGCGC
GCGTTCACGC ACGTGACCGA CAACACGGCG ACGTTCCTCG CGGTCGCGGG TGTCACGCCG
CCGTCGCAGC CGGCGCCGCC GCTCGTCAAC ACGCTGACGG GCGTCGACCA GAACAAGGGC
AAGGTGGTCT ACAACAACCG CTACGTGTAT CCGGTCACGG GCCAGTCGCT GCTGCCGGTG
CTCACCGGTT CGGCGACGGG CGAAGTGCAC ACGACGCCGT TCGGCGACGA AGCGTACGGC
CGCGCGTATC TGCGCAGCGC CGACGGCCGC TGGAAGGCAT TGTGGACCGA GCCGCCGCTC
GGCCCGCTCG ACGGTCACTG GCAGCTTTAC GACCTCGCGT CGGATCGCGG CGAGACGACC
GACGTGTCCG CGCAGAACCC GTCGGTGATC GGCACGCTGG TCGACCAGTG GAAGACCTAC
ATGGGCAACG TCGGCGGCGT CGAACCGCTG CGTCCGCGCG GCTACTACTG A
|
|---|
| Protein sequence | MKKSASPLHA FRFRVVCAAI AGAVSLASCG GVDSDAPPSQ AGVTPTPTPT QAAKRPNILY
IMADDLGYSD IHAFGGEINT PNLDALVASG RILSNHHTGT VCAITRAMLV SGTDHHLVGE
GTMGVPTDER RGLPGYEGYL NDRALSFAQL LKDAGYHTYI AGKWHIGSGI VGSTTGSGQT
PDQWGFERSY VLLGGAATNH FAHEPAGSSN YTEDGRYVQP GQPGQPGGTG GSPAVFYSTD
FYTQKLISYI DANKQDGKPF FAYAAYTSPH WPLQVPDPWL HKYAGVYDAG YDAIRNARIA
RQKALGLIPA DFKPFDGLPE TTVASPATAN NGTASAKYIN AVHSAADGYS DYGPGKVDKL
WSSLSPAERK AQARYMEIYA GMVENLDYNI GLLIQHLKDI GEYDNTFIMF QSDNGAEGWP
IDSGADPTAT DTANAQEPTY SALGTDNGKQ NAQRLQYGLR WAEVSAAPFR LTKGYSGEGG
VSTPTIVHLP GQSQSLPTLR AFTHVTDNTA TFLAVAGVTP PSQPAPPLVN TLTGVDQNKG
KVVYNNRYVY PVTGQSLLPV LTGSATGEVH TTPFGDEAYG RAYLRSADGR WKALWTEPPL
GPLDGHWQLY DLASDRGETT DVSAQNPSVI GTLVDQWKTY MGNVGGVEPL RPRGYY
|
|---|
| |