| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3968 |
|---|
| Symbol | |
|---|
| ID | 6126801 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | - |
|---|
| Start bp | 900512 |
|---|
| End bp | 901810 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641651076 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001777609 |
|---|
| Protein GI | 170736349 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0624321 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAGCA AGACCCTCGC GGCGCCCGCC GCCGAGCCCG CGAGCCGCGA ACGCAACGGC
CTGTTCTCAT GGTACGCGGA TGCGCAGCCG CGCGAGCGCC GCGCGTTCTG GAGCTGCAAG
GTCGGCTACA TGCTCGACGG GATGGACACG CAGATGTTGT CGTTCGTGAT CCCGACGCTC
GTCGCGACCT GGGGCATCTC GCTCGCCGAC GCGGGCTTCA TCGGCACGAT CACGTTGCTC
GCGTCGGCGC TCGGCGGCTG GATCGCCGGC ATCCTGTCCG ACCGAATTGG CCGCGTGCGC
ACGCTGCAGC TCACGGTGCT GTGGTTCGCG GTGTTCACCG CGCTGTGCGG GCTCGCGCAG
AACTACCACC AGCTGGTCGC GGCGCGCGCG CTGATGGGCT TCGGCTTCGG CGGCGAATGG
ACGGCCGGCG CGGTGCTGAT CGGCGAAGTG ATCCGCGCGC GCGACCGCGG CAGGGCGGTC
GGCCTCGTGC AGTCGGGCTG GGCGATCGGC TGGGGGCTGT GCGCGCTGCT GTATGCGCTG
CTGTTCTCGG TGCTGCCGGC CGAGCAGGCG TGGCGCGCGC TGTTCCTGGT CGGGCTCGCG
CCTGCGCTGC TGGTCGTCGT GATCCGCCGC TATGTGAAGG AGCCGGACGT CTACGAGAAG
GAGAAGGCCG CGCAGGCGAA AGTGGCCGAT GCGCCGCGCC TCACCGAGAT CTTCGCGCCG
AAACTGATCA CGACGACGCT GCGCGCGGCG CTGCTGACGA CCGGCGCGCA GGGCGGCTAC
TACGCGATCA CGACGTGGCT CCCGACCTTC CTGAAGACCG AACGGCACCT GACGGTGATG
GGCACCGGCG GCTATCTCGC GATGATCATC TTCGGCTCGT GGGTCGGCTA CCTGACGAGC
GCGTACCTGA CCGACCGCCT TGGCCGCAAG CCGAACTTCA TCCTGTTCGC GGTCGGCTCG
ATGGTGATCG CGTTCGCGTA CACGTCGCTG AACCTGACCA ACGCGTCGAT GCTGTGGCTC
GGCTTCCCGC TCGGCTTCTT CGCATCGGGC ATCTTCTCGG GGATGGGCGC ATTCCTCACC
GAGCTGTTCC CGACCCGCGT GCGCGGTTCC GGCCAGGGCT TCTGCTACAA CGTGGGCCGC
GCGATCGGTG CGCTGTTCCC GTTCCTGATC GGCGCGCTGT CGAAGCAATA CGGGCTCGGC
ACGAGCATCG GCATCTTCGC GGTCGCCGCC TACGGCGTGG TGATCGTCGC CGCGCTGACG
CTGCCCGAGA CCCGCGGCCG CGAACTCGAC GCCGCCTGA
|
|---|
| Protein sequence | MESKTLAAPA AEPASRERNG LFSWYADAQP RERRAFWSCK VGYMLDGMDT QMLSFVIPTL
VATWGISLAD AGFIGTITLL ASALGGWIAG ILSDRIGRVR TLQLTVLWFA VFTALCGLAQ
NYHQLVAARA LMGFGFGGEW TAGAVLIGEV IRARDRGRAV GLVQSGWAIG WGLCALLYAL
LFSVLPAEQA WRALFLVGLA PALLVVVIRR YVKEPDVYEK EKAAQAKVAD APRLTEIFAP
KLITTTLRAA LLTTGAQGGY YAITTWLPTF LKTERHLTVM GTGGYLAMII FGSWVGYLTS
AYLTDRLGRK PNFILFAVGS MVIAFAYTSL NLTNASMLWL GFPLGFFASG IFSGMGAFLT
ELFPTRVRGS GQGFCYNVGR AIGALFPFLI GALSKQYGLG TSIGIFAVAA YGVVIVAALT
LPETRGRELD AA
|
|---|
| |