Gene Bcenmc03_3951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3951 
Symbol 
ID6126784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp880342 
End bp881472 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content69% 
IMG OID641651059 
Productalanine racemase domain-containing protein 
Protein accessionYP_001777592 
Protein GI170736332 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3616] Predicted amino acid aldolase or racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.274833 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACCTTC ACACCCTCAA CACCCCCGCC GCATTGATCG ACGTCGCCCA CATGCAGCGC 
AATATCGCCC GCATGCAGAC GCATCTGGAC GCGCTCGGCG TGCGGTTCCG GCCGCACGTG
AAGACCACCA AATGCCAACA AGTGGTCGAC GCGCAGATCG CGGCCGGCGC GCAGGGCATC
ACGGTGTCGA CGCTCAAGGA AGCCGAGCAG TTCTTCGCGG ACGGCATCCG CGACATCGTC
TATGCGGTCG GCATGGTGCC CGCCAAGCTC GGCCAGGCGC TTGCGCTGCG CCGCCAAGGC
TGCGACCTGA AAATCGTCGC CGACAGCCTG CCGGCCGCGC ACGCGATCGC CGCGTTCGGG
CGCGAGCACG GCGAACGTTT CGACGTGTGG ATCGAGGTCG ACGTCGACGG CCACCGCTCG
GGCATCCCGC CCGACGCCGA CCTGCTGATC GACGTCGGCC GCGCGCTGAC CGACGGCGGC
ATGCTGCTCG GCGGCGTGCT CGCTCACGCG GGCTCCAGCT ACGAATACGA CACGCCCAAG
GCGCTGGCCG CGATCGCCGA ACAGGAGCGC AGCCGCACCG TGCGGGCCGC GGAGCGCCTG
CGGGCCGCCG GCTTGCCGTG CCCGGTCGTG AGCATCGGGT CGACGCCCAC CGCGCTGGCG
GCGGAACGGC TCGACGGCGT GACCGAAGTG CGCGCCGGCG TGTACGTATT GTTCGACCTC
GTGATGCACA ACGTCGGCGT GTGCGAACTG TCCGACATCG CGCTGTCGGT GCTGACCACC
GTCATCGGTC ATCAGGAAGA GAAAGGCTGG GCGATCGTCG ACGCGGGCTG GATGGCGATG
AGCCGCGACC GCGGCACGCA GCGCCAGGCG CACGATTTCG GCTACGGGCA GGTCTGCACC
GAAGCCGGCG ACGTGCTCGG CGGCTATCTG CTGAGCGCCG CCAACCAGGA ACACGGGATC
GTGTCGCGAA CGGATACGCC GGATACGGGC ATCGCGCAGC GTTTTCCGAT CGGCACGCGG
CTGCGCATCC TGCCGAATCA TGCGTGCGCG ACCGGCGCGC AGCATCCCGA ATATCAGGCC
GTCGGCGATG ACGGCGCCGC GCAGACGTGG CCGCGCTTCT ACGGGTGGTA A
 
Protein sequence
MDLHTLNTPA ALIDVAHMQR NIARMQTHLD ALGVRFRPHV KTTKCQQVVD AQIAAGAQGI 
TVSTLKEAEQ FFADGIRDIV YAVGMVPAKL GQALALRRQG CDLKIVADSL PAAHAIAAFG
REHGERFDVW IEVDVDGHRS GIPPDADLLI DVGRALTDGG MLLGGVLAHA GSSYEYDTPK
ALAAIAEQER SRTVRAAERL RAAGLPCPVV SIGSTPTALA AERLDGVTEV RAGVYVLFDL
VMHNVGVCEL SDIALSVLTT VIGHQEEKGW AIVDAGWMAM SRDRGTQRQA HDFGYGQVCT
EAGDVLGGYL LSAANQEHGI VSRTDTPDTG IAQRFPIGTR LRILPNHACA TGAQHPEYQA
VGDDGAAQTW PRFYGW