Gene Bcenmc03_3940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3940 
Symbol 
ID6126773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp868040 
End bp868570 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content71% 
IMG OID641651048 
Producthypothetical protein 
Protein accessionYP_001777581 
Protein GI170736321 
COG category[S] Function unknown 
COG ID[COG4950] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.007484 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACT CCATCACGCC GGCCGCCGCG CCGGATACGA TCGACGCGGC AGCCGGCCTG 
CGGGAAGGCG ACGCCGTCGC CGCGCTGCGC CGCGCCCGCG ACAAGGTGCT GCTTCCGACG
CAACTGAGCG AAGCCGCGCT GTTCGATCCC GCGCTGCCCG ATCTTTCGCT GATCGAGCGG
CTGCATGCGG CACGGTATGT CGCGCGGCAG TCGAATGCAC ACGCGCTGGC CGACATCTAT
CGCGCCCGAT TGCTCGACGC AGGCGGCACG CTTGCCGACA TCGAACGAGC CGATGCCGAC
GCGCTCGACG CACTGCCGCG CCGCCTCGGC GCGATCCTGT TGCACGCGAA GCGCCTGACA
CACGCGCCGG TCGACGCGCG CGCATCCGAT CTCGACGCGC TGAAATCGGC CGGACTCACG
ACACCCGCGA TCGTCGCGCT GTCGCAGCTC GTCGCGTTCG TCGCGTATCA GTTACGCGTC
GCCGCCGCGG CGCGGGCACT TCACGCACGT GCCGCCAGGG AGGCCGCATG A
 
Protein sequence
MTDSITPAAA PDTIDAAAGL REGDAVAALR RARDKVLLPT QLSEAALFDP ALPDLSLIER 
LHAARYVARQ SNAHALADIY RARLLDAGGT LADIERADAD ALDALPRRLG AILLHAKRLT
HAPVDARASD LDALKSAGLT TPAIVALSQL VAFVAYQLRV AAAARALHAR AAREAA