Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_3936 |
Symbol | |
ID | 6126769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 862174 |
End bp | 863985 |
Gene Length | 1812 bp |
Protein Length | 603 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641651044 |
Product | inner-membrane translocator |
Protein accession | YP_001777577 |
Protein GI | 170736317 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.240526 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTCCT GGCTCGACTA CACGCTCAAC GGCCTCATCG TCGGCAACAT CTACGCGCTG CTCGCGGTCG GGCTCGCGCT GATCTTCGGC GTGTCGCACC TGATCAACTT CGCGCACGGC TCGGTGTACA TGGTCGGCGC GTTCATCGGC TGGCTGTGCC TGACGCGCTT CGGGCTGCCG CTGCCGGTCG CGCTCGCGGC GGTCGTGGTC GGCTGCGGCG CGCTCGGCAT CGCGATCGAA CGGATCGGGC TGCGGCCGCT GCGCCATGCC GCGCGCATCG CGCCGCTGCT CGCGACGATC GGCATCAGCT TCATCCTCGA CCAGCTCGCG CAGCTCGCGT TCGGTGCGGA CCCGCGCGCG GTGCCGACGC CGCTGCCCGA CTGGCACGTG CGGATCGCCG GCGCGACGCT CGGCTCGCTC GACTTGCTGA TCGCGGGCAT CGGCATCGCG GCGGCCGCGC TGCTGTACGG CTTCCTGCGC TTCACGCGCC TCGGCTGGGC CGTGCGCGCG ACCGCGCAGG ATCGCGATGC GGCGCTGCAG ATGGGTGTCG ACGTCGATCG CGTGAACCAG ACCGTGTTCG CGATCGCGTG CGCGCTCGGC GGCGTGAGCG GGCTGCTGGT CGGCATGTAC TACAACAGCA TCGATCCGGC GATGGGTTTC CAGGCGACGC TGAAGGGCGT CGTCGCGCTG CTGATCGGCG GCCTCGGCAA CGTGCCGGGC GCGATCGCGG GCAGCCTGCT GCTCGGTCTC GTCGAAAGCT ACGGCGTCGC GCTGTTCGGC ACCAGCTATC GCGACCTGTT CGCGTTCGGG CTGCTGATCG TATTCCTCGT GTGGCGGCCG AACGGCTTGT TCAGCGCGAA TCGCGCGCTG CCGCCCGAGC CGATGACGGG CACTTTCCTC GCCGCCGCGA AAGCGGTGCG CGTACCGCGC CCGCTGCTCG TCGCGCTGAT CGCGGCGGCG GCCGTGCTGC CGTGGCTCGG TGCATCGCCG TACGTGCTGC AGACGCTGAC CAACGCGTGG CTGTACGGGC TGCTCGCGCT GAGCCTCACG CTCGTCGCGG GCACGGTCGG GCAGATCTCG CTCGGCCACG CCGCGCTGCT CGTGATCGGC GCGTATGCGT CGGCGCTGCT GTCGTCGGAT CTCGGCTGGT CGCCGGCCGT GACGATTCCG TGTGCGGGCG TGATCACCGC CGTGCTCGGC ACGCTGCTCG TCTATCCGGC GTTCCGGCTG CGCGGGCACT ACGTGTCGAT CGCGACGCTC GGCATCGGCG AAGTGGTGAG TCTCGTGATC CTGAACTGGG ACGGCCTGAC GCGCGGCCCG CTCGGCATCA CCGGCATCGC GCCGCTGCCG TGGGCGACGA CCGCGCGCGC CGCGTACTGG TTCACGTTCG CGGTGCTCGT CGTGTTCGCG CTCGTGCAGG TGAGGCTGCT GCGTTCGCAT CTGGGCCGCA CGCTGCGCGC GGTGCGCGAG GACGACGTCG CCGCGCGTGC GCACGGCATC GCACCGAACC GCTACAAGGC GATCGCGTTC GCGGTCGGCG GCGTCGCGGC CGGCGTGAGC GGCGGCATTG CCGCGCATCT GTACAGCTAC ATCAATCACC AGACCTTCGA TTCGCAGGTG TCGATCCTCG CGTTGACGAT GGTGATCCTC GGCGGGCTCG GCAACGTGCT CGGCGGCATC GTCGGCGCGA TCGCGCTGAT CGGGCTGCCC GAACTGTTCC GCTGGGCGGC CGATTACCGG ATGCTGATCT ACGGCCTCGT GCTGCTGCTG CTCGTCCGGT TCCGGCCGCA GGGCCTGCTC GGCACGGTGT GA
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Protein sequence | MASWLDYTLN GLIVGNIYAL LAVGLALIFG VSHLINFAHG SVYMVGAFIG WLCLTRFGLP LPVALAAVVV GCGALGIAIE RIGLRPLRHA ARIAPLLATI GISFILDQLA QLAFGADPRA VPTPLPDWHV RIAGATLGSL DLLIAGIGIA AAALLYGFLR FTRLGWAVRA TAQDRDAALQ MGVDVDRVNQ TVFAIACALG GVSGLLVGMY YNSIDPAMGF QATLKGVVAL LIGGLGNVPG AIAGSLLLGL VESYGVALFG TSYRDLFAFG LLIVFLVWRP NGLFSANRAL PPEPMTGTFL AAAKAVRVPR PLLVALIAAA AVLPWLGASP YVLQTLTNAW LYGLLALSLT LVAGTVGQIS LGHAALLVIG AYASALLSSD LGWSPAVTIP CAGVITAVLG TLLVYPAFRL RGHYVSIATL GIGEVVSLVI LNWDGLTRGP LGITGIAPLP WATTARAAYW FTFAVLVVFA LVQVRLLRSH LGRTLRAVRE DDVAARAHGI APNRYKAIAF AVGGVAAGVS GGIAAHLYSY INHQTFDSQV SILALTMVIL GGLGNVLGGI VGAIALIGLP ELFRWAADYR MLIYGLVLLL LVRFRPQGLL GTV
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