Gene Bcenmc03_3934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3934 
Symbol 
ID6126767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp860544 
End bp861308 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content67% 
IMG OID641651042 
ProductABC transporter related 
Protein accessionYP_001777575 
Protein GI170736315 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.190157 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTGC AATCTTCCGT GCCTGATACG ACCATGACCA ACGCGCTGCT GAAACTCGAA 
CATCTCGACA CGTTCTACGG ACCGGTGCAG GTTCACTTCG ACGTGAACTT CGAGGTCGGC
CGCGGGCAGA TCGTCAGCCT GCTCGGCGGC AACGCGAGCG GCAAATCGAC GACGATGAAG
CTGATTCTCG GGCTGATGCG GCCGAAGCGC GGCGTCGTGC GTTTCGACGG CAACGACGTG
ACGGCGCTTG CGACGCCGCA GCGCGTGCGG CGCGGGATCG CGGCCGTGCC CGAGGCGCGG
CGGCTGTTCG GCGACATGAG CGTGCGCGAG AACCTGCTGA TGGGCGCGTA CACGCGCGGC
GATCGTGCGG CGGTCGCCGA CGACTACGAG CGTGTGCTCG ACCTGTTTCC GCGTGTGCAC
GAACGGCTCG CGCAGCGCGC GGGCACGCTG TCGGGCGGCG AGCAGCAGAT GCTCGCGATG
GCGCGTGCGC TGATGGCGCG GCCGAAACTG ATCTGCATGG ACGAGCCGAC GATGGGGCTG
TCGCCGCTGT ATGTCGACAA GGTGCTCGAA CTGATCGACG CGATCAACCG GCAGGGCGTG
ACGGTGTTCA TGGTCGAGCA GAACGCGAGC CTCGCGCTGG AGATCGCGCA CTACGGGTAC
GTGCTGCAGA CGGGGCGCGT CGTGCTGGAA GGGCCCGCGA AAACGCTGCT CGACGATGAG
CGCGTACGCG ATGCGTATCT CGGCGGGGAG GCGGTGGCGG TGTAG
 
Protein sequence
MTVQSSVPDT TMTNALLKLE HLDTFYGPVQ VHFDVNFEVG RGQIVSLLGG NASGKSTTMK 
LILGLMRPKR GVVRFDGNDV TALATPQRVR RGIAAVPEAR RLFGDMSVRE NLLMGAYTRG
DRAAVADDYE RVLDLFPRVH ERLAQRAGTL SGGEQQMLAM ARALMARPKL ICMDEPTMGL
SPLYVDKVLE LIDAINRQGV TVFMVEQNAS LALEIAHYGY VLQTGRVVLE GPAKTLLDDE
RVRDAYLGGE AVAV