Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_3934 |
Symbol | |
ID | 6126767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 860544 |
End bp | 861308 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641651042 |
Product | ABC transporter related |
Protein accession | YP_001777575 |
Protein GI | 170736315 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.190157 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTGC AATCTTCCGT GCCTGATACG ACCATGACCA ACGCGCTGCT GAAACTCGAA CATCTCGACA CGTTCTACGG ACCGGTGCAG GTTCACTTCG ACGTGAACTT CGAGGTCGGC CGCGGGCAGA TCGTCAGCCT GCTCGGCGGC AACGCGAGCG GCAAATCGAC GACGATGAAG CTGATTCTCG GGCTGATGCG GCCGAAGCGC GGCGTCGTGC GTTTCGACGG CAACGACGTG ACGGCGCTTG CGACGCCGCA GCGCGTGCGG CGCGGGATCG CGGCCGTGCC CGAGGCGCGG CGGCTGTTCG GCGACATGAG CGTGCGCGAG AACCTGCTGA TGGGCGCGTA CACGCGCGGC GATCGTGCGG CGGTCGCCGA CGACTACGAG CGTGTGCTCG ACCTGTTTCC GCGTGTGCAC GAACGGCTCG CGCAGCGCGC GGGCACGCTG TCGGGCGGCG AGCAGCAGAT GCTCGCGATG GCGCGTGCGC TGATGGCGCG GCCGAAACTG ATCTGCATGG ACGAGCCGAC GATGGGGCTG TCGCCGCTGT ATGTCGACAA GGTGCTCGAA CTGATCGACG CGATCAACCG GCAGGGCGTG ACGGTGTTCA TGGTCGAGCA GAACGCGAGC CTCGCGCTGG AGATCGCGCA CTACGGGTAC GTGCTGCAGA CGGGGCGCGT CGTGCTGGAA GGGCCCGCGA AAACGCTGCT CGACGATGAG CGCGTACGCG ATGCGTATCT CGGCGGGGAG GCGGTGGCGG TGTAG
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Protein sequence | MTVQSSVPDT TMTNALLKLE HLDTFYGPVQ VHFDVNFEVG RGQIVSLLGG NASGKSTTMK LILGLMRPKR GVVRFDGNDV TALATPQRVR RGIAAVPEAR RLFGDMSVRE NLLMGAYTRG DRAAVADDYE RVLDLFPRVH ERLAQRAGTL SGGEQQMLAM ARALMARPKL ICMDEPTMGL SPLYVDKVLE LIDAINRQGV TVFMVEQNAS LALEIAHYGY VLQTGRVVLE GPAKTLLDDE RVRDAYLGGE AVAV
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