| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3926 |
|---|
| Symbol | |
|---|
| ID | 6126759 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | + |
|---|
| Start bp | 852649 |
|---|
| End bp | 854445 |
|---|
| Gene Length | 1797 bp |
|---|
| Protein Length | 598 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641651034 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_001777567 |
|---|
| Protein GI | 170736307 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4585] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCCG CCTTCCGCTT CCCGCCCACG TCGCCGCCGG ACGACGACGA TCCGGACACG
TCGCGTCTGT TCATGTCGTC GCTGCCGCCG GGCCGGCGCG AGCGGCGGCT CGCGCTCGCG
ACGGTACTCG TATCGGTCGT GATCTTCGCC GCGCTCGCAC CGTTCGCGGC CATGCCGCTC
GCGCCGGGCT GGGCGTTCAT TCCCGTGTAC CAGTCGGCGA TCGTGATCAA CGACATGGTG
ACGGCCGGCC TGCTGCTCGG CCAGTACGCG ATCCTGCGCG AGAAGCCGCT GCTCGTGCTG
GCGGGCGGCT ACCTGTTCAC GGCGTTCATG GCCGGCACGC ACATGCTGAC CTTCCCCGGG
CTGTTCACGC CGACCGGCCT GCTCGGCGCC GGCGAACAGA CCACCGCATG GCTGTACCTG
TTCTGGCATG GCGGCTTTCC GCTGTCGGTC GCCGCGTACG CGCTGCTGCG CGCGACGTCG
CGGGGGCGCC CGGCTCCGGC CCCGCAGCGG CGCGCGGCGA TTCCGGTCGT CCTCTGCCTC
GTGGCCGCCG GCGGCGCGAC GGCCGCGCTC GCGCTGCTCG CGACCGCCGG CCACGCCCTG
CTGCCGCACA TCATGAGCGG CAACCGGATG ACCTCGACGA TGACGAACGC GATCACGGTC
GTCTGGGGCT TGAACCTCGT CGCGCTGATG CTGATGTGGC GGCAGCGGCG CCGCCATTCC
GTGCTCGACC TGTGGGTGAT GACGGTGCTC GTCGCGTGGC TGTTCGACAT CGCGCTGTCG
TCAATGCTCA ATCACGGGCG CTTCGATCTC GGCTTCTATG CGGGGCGCGC GTACGGTCTC
GTCGCGTCGG GCGTCGTGCT GTTCGCGATG CTGTTCGAGA ACGGCCGGCT GCATGCGCAG
ACGGTGCGCG CGCTGGCCGG CGCGCGCTAC CAGCATCTGC TCGTCGTGCA GAAAAGCGCG
CAGTTGAACG ATGCGAACGA ACGGCTCGAA CAGCGCGTCG CCGCGCGCAC CGCGCAACTG
AGCGCGTCGA ACCGCGACCT GCGGCGCGAA GTCGAGGAGC GCGTACGCGC GGAGCGGGCG
CTACAGGCCT CGCGCGAGGA ACTGCGCGAG ATCGCCGCGA TCAGCGCCAG CGCGCGCGAA
GCGGAGCAGC GCCGCATCGC GCGCGAACTG CACGACGAAC TGGCGCAGAC GCTCGCGACG
CTGAAGAACG ATCTCGAATG GCTGATCGAC CACGTGCCGC AGGACGACGC ATCGCTGGCA
CGCAAGATCG CGGCGATGCA CGCGCTCGCG CGCGGCGCGG TGGCCGCGAC CCGCCGCATC
GCGTCGGACC TGCGCCCGCT GATGCTCGAC GATCTCGGCT TCGCGGCCGC GATGCAATGG
CTCGTGGAGG ATTTCCGGCA CCGTCACGGG ATTGCCTGTT CGCTGCGCGT CGAGCCACCG
GAGCTGCAAC TCGACGAGCC GTACGCGACG GCCGTGTTCC GCATCGCGCA GGAAGCGCTC
GCGAATGTCG CCCGGCACGC GGCCGCGTCG CATGCGGACG TCGAACTCGT GTGCGGCGGC
GAAGCGATCG CGCTGACGAT ACGCGACGAC GGCGCGGGAT TCGATCCCGC GGTGCCGCGC
AAGTCGGCGT CGTTCGGGCT GGTGGGATTA CGCGAGCGAG CGTATCTGGT CGGCGGCACG
CTGCGGATCG CGACGACGCT CGGCGAGGGG ACGACGGTCG AGGTGGAGAT TCCGCGGGCG
CCGGCGCCTG TGGCGGTCGC GCATGGCGTG GACGGGGATT CGCGAATCAA TCGCTGA
|
|---|
| Protein sequence | MTAAFRFPPT SPPDDDDPDT SRLFMSSLPP GRRERRLALA TVLVSVVIFA ALAPFAAMPL
APGWAFIPVY QSAIVINDMV TAGLLLGQYA ILREKPLLVL AGGYLFTAFM AGTHMLTFPG
LFTPTGLLGA GEQTTAWLYL FWHGGFPLSV AAYALLRATS RGRPAPAPQR RAAIPVVLCL
VAAGGATAAL ALLATAGHAL LPHIMSGNRM TSTMTNAITV VWGLNLVALM LMWRQRRRHS
VLDLWVMTVL VAWLFDIALS SMLNHGRFDL GFYAGRAYGL VASGVVLFAM LFENGRLHAQ
TVRALAGARY QHLLVVQKSA QLNDANERLE QRVAARTAQL SASNRDLRRE VEERVRAERA
LQASREELRE IAAISASARE AEQRRIAREL HDELAQTLAT LKNDLEWLID HVPQDDASLA
RKIAAMHALA RGAVAATRRI ASDLRPLMLD DLGFAAAMQW LVEDFRHRHG IACSLRVEPP
ELQLDEPYAT AVFRIAQEAL ANVARHAAAS HADVELVCGG EAIALTIRDD GAGFDPAVPR
KSASFGLVGL RERAYLVGGT LRIATTLGEG TTVEVEIPRA PAPVAVAHGV DGDSRINR
|
|---|
| |