| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3920 |
|---|
| Symbol | |
|---|
| ID | 6126753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | + |
|---|
| Start bp | 845564 |
|---|
| End bp | 848014 |
|---|
| Gene Length | 2451 bp |
|---|
| Protein Length | 816 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641651028 |
|---|
| Product | alpha/beta hydrolase domain-containing protein |
|---|
| Protein accession | YP_001777561 |
|---|
| Protein GI | 170736301 |
|---|
| COG category | [I] Lipid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0657] Esterase/lipase
[COG2072] Predicted flavoprotein involved in K+ transport |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.41262 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTCGC CTGATCCTTC CCGTTCCGCC GACTCCGCCA CACCGCTTGC GGCGATCATC
ATCGGCGCCG GCTTCGCCGG CATCGGCATG GCGATTGCGC TGCAACGCGC CGGCATTCAC
GATTTCGTGA TCGTCGAACG CTCGCACGAC GTCGGCGGCG TGTGGCGCGA CAACCGCTAT
CCGGGCGCCG CCTGCGACGT GCCTTCGCAC CTGTACTCGT TCTCGTTCGA ACCCAATCCC
GCGTGGTCGC GCGTGTTCGC GCCGCAGCCC GAGATTCATG CGTACCTGCA ACACTGCGCA
CGCAAGTACG GTCTCGCCCG CCATCTGCGC TTCGGCGCCG AAGTCGAACA CGCGCGCTAC
GACGAAGCCG ATGCGCTGTG GCACGTCACG CTGCGCGACG GCACGACGCT GAGCGCCGCG
CTGCTCGTCA GCGGCACCGG CCAGTTGAGC CGCCCCGCCA TGCCGAACCT GCCGGGCATC
GACACGTTTC GCGGCCGTGC GTTCCACTCC GCGCACTGGG ATCGCGATTA CGCACTCGCC
GGCAAACGGG TGGCCGTGGT CGGCACCGGT GCATCGGCGA TCCAGTTCGT TCCGGCGATC
GCCGGCGACG TGCGACGCCT GATCGTGTTC CAGCGCTCGC CGGCCTATGT GATGCCGCGC
CCCGACCGCG CGTATCGCCC GTGGGAAAAG GCGCTGTTTC GCCGGCTGCC GGCGGCGATG
AAACTGCATC GCGCATCGAT CTACCTGCGC TACGAAGCGC GTGCGATCGC GTTCACGCGG
CTGCACGGGT TGATGAAGGT CGCGGTCGGC CGGCCGTTTC GCAAGCTGCT CGCGCGCGAC
GTGCCGGACC CCGCGCTGCG CGCACGGCTC ACGCCCGATT ATCCGGTCGG CTGCAAGCGC
ATCCTGCTGT CGAGCGACTA TCTCGCCGCG ATGAGCCGCG ACCATGTGGA ACTCGTCACG
CAGCCGATCC GGCGCGTGAC CGAGGACGGG ATCGAGACCG TCGACGGCGT GCATCATCCC
GTCGACGCGA TCGTCTACGG CACGGGGTTC GCGGCAACGG AATTCCTGTC GCCGATGCGC
ATCACGGGCC GCGGCGGCCT CGACCTGAAC GATGCGTGGC GACGCGGCGC GCAGGCGTAT
CTCGGGCTCA CCGTGCCCGG CTTTCCGAAC TTCTTCATGC TGTACGGCCC GAACACCAAC
CTCGGTCACA ACTCGATCGT CTACATGCTC GAGAGCCAGA TCGCGCACGT GATGCGCTGC
ATACAGGCGA TGCGTCGCGA CGGCGCACGC GAGATCGACG TCGACGCGCG CCGCTACCGG
CGTTTCAACG TGCGCGTGCA GCAGCGGCTC GCAGGGTCGG TGTGGAGCAG TTGCAAGAGC
TGGTACGTCG ATGCATCGGG GCACAACAGC ACGAACTGGC CGGGCTTCAC GCTGACCTAC
CGGTGGATCA CGCGCTTCAC CGGCATGTCC GCGTACCGCT TGTCGCAGCC GCTGCCCGGG
GCGGCCGCGC CGATGCACGG CACGGTGGTC GCGCCGCCCG CCGGCAGATT CGAAGCCTTC
ACGGCCGCTT CGTTGCGCGG TTTCCTGCGC GTCGCGTTCC GGCCGCTGAT CGGGCCGCCG
TTCGGCGCGC GCATGCAGCG CCGCGTCGTC GCGCTGCTGT CGCCGCTGAT GCCTGGTGCG
GGCGGTACGC TGCGCTACCG CACGTCGGCG CAGCATGTGC CGATCGAAGT GGTCGCGCCG
AAGCGCGGCG ATACGGGTGG CGGGATTCTC TATCTGCACG GCGGCGCGTT TTGTCTCGGC
GGACCGCATA CGCATCGCGG CGTGACGACG CGCCTCGCGA ACGACGCGGG CCTGCCGGTG
TGGGTGCCCG ATTACCGGCT CGCGCCCGAG CATCCGAGCC CGGCCGCGCT CGACGACGCA
CTGGCCGCCT ACGACGCGAT GCGCACGCAG GGTTACGCGC CGCACCGGAT CGTGATTGCC
GGCGACTCGG CCGGCGGCGC GCTGGCGCTG GCGCTCGCCA TCGCGCTGCG CGAGCGCGGC
GAGCCGCCCG CCGCCGCACT GCTGCTGATC TCGCCCGTGA CCGACTCGAC GCTCGGCGGC
GCGACGCTGG CCTCGCGCCG CCACGACGAT CCGATGATCC GGCGCGGCTG GCTCGAACAG
GGGCTGCGCT GGTATCACGG CACGGGCTCC GCCGCGGCGC GCGGGCCGCT CGATACCGGT
CTGCATGGCC TGCCGCCGAT GCTGATCCAG GCCGGCGACC AGGAAGTACT GCTGTCCGAT
GCGCAGCGGC TGGCCGAGCA TGCACACGCG TGCGGCGTGC CGTGCCGGCT GGAGATTCAC
GCGGCGCGCT GGCATGTGTT TCATCTGCAG GCGTTTTACT TGCGCTCGGC GCGGGACGCG
TTGCGGACGT TGGCGGGGTT TGCGGCGGAA CGTGTCGCCA CGACGGCATG A
|
|---|
| Protein sequence | MLSPDPSRSA DSATPLAAII IGAGFAGIGM AIALQRAGIH DFVIVERSHD VGGVWRDNRY
PGAACDVPSH LYSFSFEPNP AWSRVFAPQP EIHAYLQHCA RKYGLARHLR FGAEVEHARY
DEADALWHVT LRDGTTLSAA LLVSGTGQLS RPAMPNLPGI DTFRGRAFHS AHWDRDYALA
GKRVAVVGTG ASAIQFVPAI AGDVRRLIVF QRSPAYVMPR PDRAYRPWEK ALFRRLPAAM
KLHRASIYLR YEARAIAFTR LHGLMKVAVG RPFRKLLARD VPDPALRARL TPDYPVGCKR
ILLSSDYLAA MSRDHVELVT QPIRRVTEDG IETVDGVHHP VDAIVYGTGF AATEFLSPMR
ITGRGGLDLN DAWRRGAQAY LGLTVPGFPN FFMLYGPNTN LGHNSIVYML ESQIAHVMRC
IQAMRRDGAR EIDVDARRYR RFNVRVQQRL AGSVWSSCKS WYVDASGHNS TNWPGFTLTY
RWITRFTGMS AYRLSQPLPG AAAPMHGTVV APPAGRFEAF TAASLRGFLR VAFRPLIGPP
FGARMQRRVV ALLSPLMPGA GGTLRYRTSA QHVPIEVVAP KRGDTGGGIL YLHGGAFCLG
GPHTHRGVTT RLANDAGLPV WVPDYRLAPE HPSPAALDDA LAAYDAMRTQ GYAPHRIVIA
GDSAGGALAL ALAIALRERG EPPAAALLLI SPVTDSTLGG ATLASRRHDD PMIRRGWLEQ
GLRWYHGTGS AAARGPLDTG LHGLPPMLIQ AGDQEVLLSD AQRLAEHAHA CGVPCRLEIH
AARWHVFHLQ AFYLRSARDA LRTLAGFAAE RVATTA
|
|---|
| |