Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_3919 |
Symbol | |
ID | 6126752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 843859 |
End bp | 845577 |
Gene Length | 1719 bp |
Protein Length | 572 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641651027 |
Product | glucose-methanol-choline oxidoreductase |
Protein accession | YP_001777560 |
Protein GI | 170736300 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.326511 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAAGA CTTTCGACTA CATCGTGGTC GGTGGCGGGT CGGGCGGTTG CGTTGTCGCG GGCCGGCTGA CCGAGGACCC GGCCGTGACC GTCTGCGTGC TCGAGGCCGG CGGCCGCGGC GACAGCGCGG TCGTCAACGT GCCGACCGGC GCGGTCGCGA TGATGCCGAC CCGCCTGAAC AACTGGGCGT TCGACACGGT GCCGCAGCCG GGGCTCGGCG GGCGCATCGG CTATCAGCCG CGCGGCAGGG CGCTTGGCGG TTCGTCGGCG ATCAACGCGA TGGTCTATAT CCGCGGTCAT CGCGTCGACT ACGACGGCTG GGCCGCGCTC GGCAACGAAG GCTGGGCGTA CGACGACGTG CTGCCGTACT TCCGCCTGAG CGAGCACAAC GAGCGCTTCG ACGATGCCTG GCACGGCCGC GACGGCCCGC TGTGGGTCAG CGACCTGCGC ACCGGCAACC CGTTTCATGC GCGCTATCTG GAAGCCGCGC AACAGGCCGG CCTGCCGCTC ACCGACGATT TCAACGGCGC GCAACAGGAA GGCATCGGGA TCTACCAGGT CACGCAGAAG CACGGCGAAC GATGGAGCGC GGCGCGCGCG TACCTGCTCC CGCACGTCGG GCGCCGCGAC AACCTGACGG TCGAGACGCA CGCGCAGGTA CTGCGCATCC TGTTCGACGG CACGCGCGCG ACCGGCGTCG AGGTGCGGCA GCAGGGTGAA ATCCGCACGC TGCGCGCGCG GCGCGAAGTC GTGCTCGCGG CCGGTGCGCT GCAGACGCCG CAGTTGCTGA TGCTGTCGGG CGTCGGCCCG GGCCGCGAAC TCCAGCAGTT CGGCATCGCT GTACAGGCCG ATCTGCCGGG CGTCGGCCGC AACCTGCAGG ATCATCCGGA TTTCATCTTC GGCTACCGCA CGCGCAGCGT CGACACGATG GGCGTGTCCG TCCGCGGCGG GCTGCGCATG CTGCGCGAAT TCGCCCGCTT TCGCCGCGAA CGGCGCGGGA TGCTGACGTC GAACTTCGCG GAAGGCGGCG GTTTCCTCAA GACGCGCGCC GATCTCGCCG CACCGGACAT CCAGCTGCAT TTCGTCGTCG CGCTCGTCGA CGACCATGCG CGCAAGCTGC ATGCCGGTCA CGGGCTGTCG TGCCACGTGT GCCTGTTGCG GCCGCGCAGC CGCGGCTCGG TCACGCTGAA CAGCGCCGAC CCGCTCGCGG CGCCGCGCAT CGATCCCGCG TTCTTCGACG ATCCGCGCGA TCTCGACGAC ATGGTCGCGG GCTTCCGCCT CACACGTCGC CTGATGGATG CGCCGGCGCT CGCCAGCTGG ACCACGCGCG ACGTGTTCAC CGCGAACGTG ACGACCGACG ACGAGATTCG CGACGTGCTG CGACGGCGCG CCGACACCGT CTATCACCCG GTCGGCACCT GCCGGATGGG GCGCGACGCG CTCGCCGTCG TCGATCCGCA ACTGCGCGTG CATGGCCTGC AAGGGCTGCG CATCGTCGAT GCATCGGTGA TGCCGACGCT CATCGGCGGC AACACCAACG CGCCGACGAT CATGATCGCC GAGAAGGCCG TCGACCTGAT GCGCGGCGTA TGCCGCGTGC CGGCGCAGCC GCATGCCGAA GCCACCGTCA GGACGACGAC GGATCGTGAC CCTACCCTTG CAACCCGCGC CGCACACGCC GGCGACCAGC CCGAGGAAAC CCGCCATGCT GTCGCCTGA
|
Protein sequence | MSKTFDYIVV GGGSGGCVVA GRLTEDPAVT VCVLEAGGRG DSAVVNVPTG AVAMMPTRLN NWAFDTVPQP GLGGRIGYQP RGRALGGSSA INAMVYIRGH RVDYDGWAAL GNEGWAYDDV LPYFRLSEHN ERFDDAWHGR DGPLWVSDLR TGNPFHARYL EAAQQAGLPL TDDFNGAQQE GIGIYQVTQK HGERWSAARA YLLPHVGRRD NLTVETHAQV LRILFDGTRA TGVEVRQQGE IRTLRARREV VLAAGALQTP QLLMLSGVGP GRELQQFGIA VQADLPGVGR NLQDHPDFIF GYRTRSVDTM GVSVRGGLRM LREFARFRRE RRGMLTSNFA EGGGFLKTRA DLAAPDIQLH FVVALVDDHA RKLHAGHGLS CHVCLLRPRS RGSVTLNSAD PLAAPRIDPA FFDDPRDLDD MVAGFRLTRR LMDAPALASW TTRDVFTANV TTDDEIRDVL RRRADTVYHP VGTCRMGRDA LAVVDPQLRV HGLQGLRIVD ASVMPTLIGG NTNAPTIMIA EKAVDLMRGV CRVPAQPHAE ATVRTTTDRD PTLATRAAHA GDQPEETRHA VA
|
| |