| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3912 |
|---|
| Symbol | |
|---|
| ID | 6126745 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | - |
|---|
| Start bp | 837874 |
|---|
| End bp | 839124 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641651020 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001777553 |
|---|
| Protein GI | 170736293 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.812744 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGCAG TGCCGCAACC GGAGCGTGCC GGCCGCTCGC GGCCGGACGC CGGCGCCACC
GATCCCGGCC GCATGGCCGC GTGGCGGCTC GCGATCTGCC TGTCGCTGGG CAGCGCGATC
GCGCTCGGCC TCGCCCGCTT TTCGTATGCA CTGCTGCTGC CGCCGATGAA GGCCGACCTC
GGCTGGACGT TCGCGCAGGC CGGCGCGCTG AACACGGCGA ACGCGGCCGG TTACCTGATC
GGTGCGCTGG CCTTTCCATT GCTGTCGCGG CGCTGGCGCG CGGGCACGCT GCTCGCGGCC
GGCTGTGTGC TGACCGCCGT GCTGATGGCC GCGGGCGGGC TCACGCCGGA CATGCACGTG
CTGCTCGCGC AGCGGCTCGC AACGGGTGTC GGCAGTGCGT TGATCTTCAT CAGCGGCGGC
GTGCTGGCCG CGCGGCTCGC ATCCGCGTCG CCGCGCGACG CAGGGCTGCT GCTCGGCCTC
TATTACGGCG GCACCGGATG GGGCATCGTT GCATCGTCGC TGCTCGTGCC GGCGACGCTC
GTGCACCGTG TACACGGCTG GCAGCCGGCA TGGTTCGCAC TCGCGGTGGC GTGCGTGTTG
TTCTCGGCGG TGGCCGTGTC GGCTGCGCGC CGCATCGAGC ATGCGCATGC GGCACCGGCC
ACGCAGGCCG ACGGCGCGAA ACCGGCCGCG ACCGCGAGCC CCGCCCGCTT CGCACTCGCG
CTGGCCGGCT ACGGCCTGTT CGGCGTCGGC TATATCGGCT ACATGACGTT CATCGTCGCG
CTGCTGCGCG GCGCGGGGAT GAGCGGCACG GTGGTTGCCG CGTTCTACGT GATGCTCGGC
GTCGCGACCG TCGTGTCGGC GCGGTTGTGG TCGGGGCTGC TCGACCGGAT GCGCGGCGGC
CAGGCCCTCG CCGTGCTCAA CGCGCTGCTC GGCGTCGCGA CGCTGATGCC CGCGCTGTTC
GTGCATCCGG CTGCCGCGTT CGCGTCGGGC TTGCTGTTCG GCGCGACGTT CCTGTCGGCG
GTGGCCTCCA CGACCGCCTT CGTGCGGCAC AACCTGCCGC CCGATGGTTG GGCGAAGGGC
ATCAGCGCAT TCACGACGGT CTTCGCCTTC GGGCAGATCG CGGGGCCGGT CGCGATCGGC
TGGGTGTCGG ACAGCGCGGG GCTCGCGCGC GGGCTCGTGT ATTCGGCGCT GACGCTGTTC
GCGGGCGCGG CACTTGCGGC CGGGCAGCGT GCGCTGCGGG CGCCTGCGTA G
|
|---|
| Protein sequence | MRAVPQPERA GRSRPDAGAT DPGRMAAWRL AICLSLGSAI ALGLARFSYA LLLPPMKADL
GWTFAQAGAL NTANAAGYLI GALAFPLLSR RWRAGTLLAA GCVLTAVLMA AGGLTPDMHV
LLAQRLATGV GSALIFISGG VLAARLASAS PRDAGLLLGL YYGGTGWGIV ASSLLVPATL
VHRVHGWQPA WFALAVACVL FSAVAVSAAR RIEHAHAAPA TQADGAKPAA TASPARFALA
LAGYGLFGVG YIGYMTFIVA LLRGAGMSGT VVAAFYVMLG VATVVSARLW SGLLDRMRGG
QALAVLNALL GVATLMPALF VHPAAAFASG LLFGATFLSA VASTTAFVRH NLPPDGWAKG
ISAFTTVFAF GQIAGPVAIG WVSDSAGLAR GLVYSALTLF AGAALAAGQR ALRAPA
|
|---|
| |