Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_3897 |
Symbol | |
ID | 6126730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 822602 |
End bp | 823720 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641651005 |
Product | porin |
Protein accession | YP_001777538 |
Protein GI | 170736278 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.239452 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCATC CGAACGGGCG GGCCGACCGG CTTGCCGTAC CGCTTGCCGC GCTGCTGGCG TGCATGACGC TGCCTGCCGT CGCGCAATCG AGCGTGACGC TTTACGGCCG CATCGACACC GCGATCGAAT ACGCGAACGC CGGGCCGAAC CACGTGACGC GCATGGGCAG CGGCAACCTG TGGGCGTCGC AGTGGGGGCT GAAGGGCGTC GAGGATCTCG GCGGCGGCTA CGCGACGATC TTCAAGCTCG AGGACGGTTT CAACGCGGCG AGCGGCGCGC TGTCGAACAG CAGCGCGCTG TTCGGCCGCG AAGCGTGGGT CGGCATCACG GGGCCGTTCG GCGGCGTGCA GTTCGGCGAG CTCTACACGA TCCTGCATAC GACGCTCGTC ACGTACAGCC TGCCGGGGCT CGGCGCGGGG CTTGCATGGG GGAACGCGAC CAACAACTTC GTCGGGCCCG CGTTCCTGCG CGTACGGAAT TCGATGCGCT ACACGTCGCC GCGCTACGCG GGCTTCCTGC TGCGCGCGAT GGCCGCGCGC GGCGCCAACG GCACGGCCGG CCAGCCGGCG ACGCTCGGCG ATACCTACGG CGCCGGCCTC AACTACGTGC GTGGCGGGCT GTCGGTCGAC GTCGACTACA TGCAGCAGAA GTTCAGCCCG GTGGCCGCAT CGACGCTCGG GGCCACGAGC ACGGCCGCGA ACGGCAACTA CACGCTCGGC GCGATTTCGT ACGACTTCAA CGTCGTGAAG GTGGCCGCGC TGTACCTGCG CCATCGCGGC GGCCCCGATG TCGCGACCGC GATCGACAGC CAGAGCGCCT ATCCGCACAG CGACATCATG GAGCTCAGCG CGACGGTGCC GATCGGGCGC GCATCGCTGC TGCTGAGCAT CGGCCATTAC CGGAAGGTGG CCGACAGCGA CGGCAACGCC GATTCGTACG GCATCCGCTT CGACTATCCG CTGTCGAAGC GCACGGTGCT GTACACGGGC GCCGCGATGG TACGCAACGG CGCGCATGCC CGTTTCGTCG TCAACGGCGC AGCCGGCGGC GGCGTCGCGG TGGCCAAGCC GGGCGCGACC GCGAGCTCGC TCGTCGCGGG TATCCTCACG TCGTTCTGA
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Protein sequence | MNHPNGRADR LAVPLAALLA CMTLPAVAQS SVTLYGRIDT AIEYANAGPN HVTRMGSGNL WASQWGLKGV EDLGGGYATI FKLEDGFNAA SGALSNSSAL FGREAWVGIT GPFGGVQFGE LYTILHTTLV TYSLPGLGAG LAWGNATNNF VGPAFLRVRN SMRYTSPRYA GFLLRAMAAR GANGTAGQPA TLGDTYGAGL NYVRGGLSVD VDYMQQKFSP VAASTLGATS TAANGNYTLG AISYDFNVVK VAALYLRHRG GPDVATAIDS QSAYPHSDIM ELSATVPIGR ASLLLSIGHY RKVADSDGNA DSYGIRFDYP LSKRTVLYTG AAMVRNGAHA RFVVNGAAGG GVAVAKPGAT ASSLVAGILT SF
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